Jit
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NextDenovo: string graph-based de novo assembler for TGS long reads
By Jit 2502 days agogithub.com - NextDenovo is a string graph-based de novo assembler for TGS long reads. It uses a "correct-then-assemble" strategy similar to canu, but requires significantly less computing resources and storages. After assembly, the per-base error rate...JRF Bioinformatics at National Institute of High Security Animal Diseases (ICAR)
F.No. 4-59/2013-NIHSAD Dated: 21st April, 2015 SRF/ JRF job vacancies in National Institute of High Security Animal Diseases (ICAR) Name of Post : JRF No. of Post : 01 Qualification : M.V.Sc or M.Tech./M.Sc. (preferably with NET...Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
By Jit 2467 days agogithub.com - Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural advances that have proven successful in image classification. Unlike...Project Associate Bioinformatics @ IIT Mandi
Eligibility : MSc(Bio-Informatics, Bio-Tech), BSc, BE/B.Tech(Bio-Medical /Bio-Technology Engg, CSE) Location : Kulu Job Category : Govt Jobs, Research Last Date : 20 May 2015 Job Type : Full Time Hiring Process : Walk - In IIT Mandi...SqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
By BioStar 2277 days agogithub.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...Project Associate Bioinformatics @ Central Food Technological Research Institute (CFTRI)
Central Food Technological Research Institute (CFTRI) Project Assistant (Level-II) job position in Central Food Technological Research Institute (CFTRI) on a temporary contractual basis in the research project (GAP 0469) funded by Science &...AlignGraph2: similar genome-assisted reassembly pipeline for PacBio long reads
By Rahul Nayak 2068 days agogithub.com - AlignGraph2 is the second version of AlignGraph for PacBio long reads. It extends and refines contigs assembled from the long reads with a published genome similar to the sequencing genome. More...NRCO Vacancies For Junior Research Fellow – Pakyong, Sikkim
Junior Research Fellow Pay Scale:Rs 25,000/- Educational Requirements:MSc (with NET qualification) / M.Tech degree (with or without NET) with minimum 55% marks in Biotechnology/ Bioinformatics/ Molecular Biology or any other related field. Other...Steps to find palindrome in genomes !
By BioStar 1343 days agoPalindromes are sequences of nucleotides that read the same backward as forward.HECIL: A Hybrid Error Correction Algorithm for Long Reads with Iterative Learning
By Abhimanyu Singh 2871 days agogithub.com - HECIL—Hybrid Error Correction with Iterative Learning—a hybrid error correction framework that determines a correction policy for erroneous long reads, based on optimal combinations of decision weights obtained from short read...
