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ALPACA: A hybrid strategy for assembly of genomic DNA shotgun sequencing reads.
By Seema Singh 2869 days agogithub.com - ALPACA requires Celera Assembler 8.3 or later. It is recommended to build Celera Assembler from source. (Why? The pre-built binaries CA_8.3rc1 and CA8.3rc2 will work for any large data set. Detail paper...Bioinformatics Faculty at BHARATHIDASAN UNIVERSITY
BHARATHIDASAN UNIVERSITY (Reaccredited by NAAC with ‘A’ grade) TIRUCHIRAPPALLI - 620 024 I N V I T E S APPLICATIONS FOR FACULTY POSITIONS UNDER UGC XII PLAN CREATED POSTS ON CONTRACTUAL BASIS TILL 31.03.2017 IN THE FOLLOWING UNIVERSITY...GenomeMapper: Simultaneous alignment of short reads against multiple genomes
By Jit 2844 days ago1001genomes.org - GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single...R.A Bioinformatics at JNU, Delhi
R.A Jobs opportunity in Jawaharlal Nehru University (JNU) on purely temporary basis Project Title : "Structural and functional characterization of serine biosynthetic pathway enzymes from Entamoeba histolytica" No. of Post :...FinisherSC:a repeat-aware tool for upgrading de novo assembly using long reads
By Jit 2757 days agogithub.com - Here is the command to run the tool: python finisherSC.py destinedFolder mummerPath If you are running on server computer and would like to use multiple threads, then the following commands can generate 20 threads to run FinisherSC. python...Research Trainees recruitment in National Agri-Food Biotechnology Institute (NABI)
Research Trainees recruitment in National Agri-Food Biotechnology Institute (NABI) Eligibility : Pursuing final year of M.Sc./M.Tech. Subject category for training : I. Agricultural biotechnology II. Computational biology and bioinformatics...LoRMA: A tool for correcting sequencing errors in long reads
By Abhimanyu Singh 2739 days agogite.lirmm.fr - An error correction method that uses long reads only. The method consists of two phases: first, we use an iterative alignment-free correction method based on de Bruijn graphs with increasing length of k-mers, and second, the corrected reads are...M. D. University, Rohtak is looking for the post of Research Associate
M. D. University, Rohtak - Rohtak, Haryana M. D. University, Rohtak is looking vacancies for the post of Research Associate Project entitled: "Establish of Bioinformatics Facility for biology teaching through bioinformatics" Name of post:...Wtdbg2: a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore
By Neel 2697 days agogithub.com - Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT). It assembles raw reads without error correction and then builds the consensus from intermediate assembly output. Wtdbg2...Scientist E-II or F in Bioinformatics & Computational Biology at Rajiv Gandhi Centre for...
Advt. No.RGCB Advt./SCI 2015/1 Rajiv Gandhi Centre for Biotechnology (RGCB) invites applications for the following three faculty scientist positions: Scientist G in any of the following disciplines of disease biology: Cancer...
