Jit
Enthusiast computational biologist with business dream !!!
Our Sponsors
Related items
CheckM:Assessing the quality of microbial genomes recovered from isolates, single cells, and...
By Rahul Nayak 2846 days ago Comments (2)ecogenomics.github.io - CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes. It provides robust estimates of genome completeness and contamination by using collocated sets of genes that are ubiquitous...Essentials of Statistics and Data Analysis using R
Clinical Development Services Agency (CDSA) is an extramural unit of Translational Health Science and Technology Institute (THSTI), Department of Biotechnology, Ministry of Science & Technology, Government of India. CDSA has a national mandate...Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data
By Jit 1850 days agogithub.com - Ktrim is written in C++ for GNU Linux/Unix platforms. After uncompressing the source package, you can find an executable file ktrim under bin/ directory compiled using g++ v4.8.5 and linked with libz...miniasm: very fast OLC-based de novo assembler for noisy long reads
By Jit 3023 days agogithub.com - Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream...MetaPred2CS
By Manisha Mishra 3292 days agogithub.com - MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein interaction prediction methods to predict prokaryotic two-component...ALPACA: A hybrid strategy for assembly of genomic DNA shotgun sequencing reads.
By Seema Singh 2869 days agogithub.com - ALPACA requires Celera Assembler 8.3 or later. It is recommended to build Celera Assembler from source. (Why? The pre-built binaries CA_8.3rc1 and CA8.3rc2 will work for any large data set. Detail paper...Bioinformatics Faculty at BHARATHIDASAN UNIVERSITY
BHARATHIDASAN UNIVERSITY (Reaccredited by NAAC with ‘A’ grade) TIRUCHIRAPPALLI - 620 024 I N V I T E S APPLICATIONS FOR FACULTY POSITIONS UNDER UGC XII PLAN CREATED POSTS ON CONTRACTUAL BASIS TILL 31.03.2017 IN THE FOLLOWING UNIVERSITY...GenomeMapper: Simultaneous alignment of short reads against multiple genomes
By Jit 2844 days ago1001genomes.org - GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single...R.A Bioinformatics at JNU, Delhi
R.A Jobs opportunity in Jawaharlal Nehru University (JNU) on purely temporary basis Project Title : "Structural and functional characterization of serine biosynthetic pathway enzymes from Entamoeba histolytica" No. of Post :...FinisherSC:a repeat-aware tool for upgrading de novo assembly using long reads
By Jit 2757 days agogithub.com - Here is the command to run the tool: python finisherSC.py destinedFolder mummerPath If you are running on server computer and would like to use multiple threads, then the following commands can generate 20 threads to run FinisherSC. python...
