Jit
Enthusiast computational biologist with business dream !!!
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Finishing !!
By Jit 2773 days agowww.cbcb.umd.edu - The process of finishing a genome and moving it from a draft stage (the result of sequencing and initial assembly) to a complete genome is typically a time and resource intensive task. The advent of new sequencing technologies...Scientist Positions @ Gujarat State Biotechnology Mission
Gujarat State Biotechnology Mission invite applications [Online Only] under various projects* namely Gujarat Biodiversity Gene Bank (BioGene), Gujarat Institute of Genomics (GIG), Gujarat Institute of Bioinformatics [GIBS] and Gujarat Institute of...PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
By Jit 2578 days agohttps://plast.inria.fr/ - PLAST is a fast, accurate and NGS scalable bank-to-bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, such as the Blast suite of algorithms. Relying on unique software architecture,...pbalign: maps PacBio reads to reference sequences and saves alignments to a BAM file
By Jit 2404 days agogithub.com - pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file...LAPTI Lab
The main theme of our research is the understanding of how genetic information is decoded from DNA into RNA and proteins. Someone may find this topic a little strange and argue that we already know how this is happening. Translational recoding....Installing Salmon for Trinity !
By Rahul Nayak 2364 days ago Comments (1)Installing Trinity dependencies !Junior Research Fellow (JRF) / Project Fellow @ Kalasalingam University
Applications are invited from interested candidates for the post of one Junior Research Fellow / Project Fellow on a purely temporary basis in a time bound research project (3 years) sponsored by Science and Engineering Research Board, Government of...nanofilt: Filtering and trimming of long read sequencing data
By Jit 2337 days ago Comments (1)github.com - Filtering on quality and/or read length, and optional trimming after passing filters.Reads from stdin, writes to stdout. Intended to be used: directly after fastq extraction prior to mapping in a stream between extraction and...Asst. Professor @ JAIPUR NATIONAL UNIVERSITY
JAIPUR NATIONAL UNIVERSITY Established by Government of Rajasthan Approved by UGC under Sec 2(f) of UGC Act 1956 ADVERTISEMENT FOR FACULTY POSITION AT JAIPUR NATIONAL UNIVERSITY,JAIPUR Jaipur National University, Jaipur is a premier...nQuire: a statistical framework for ploidy estimation using next generation sequencing
By Jit 2271 days agogithub.com - nQuire provides a statistical framework to study organisms with intraspecific variation in ploidy. nQuire is likely to be useful in epidemiological studies of pathogens, artificial selection experiments, and for historical or ancient samples where...
