Jit
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Porechop: tool for finding and removing adapters from Oxford Nanopore reads
By Rahul Nayak 2938 days agogithub.com - Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop...JRF in Bioinformatics @ Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvananthapuram
Rajiv Gandhi Centre for Biotechnology (RGCB), Thiruvananthapuram Job Code: 060815(10)Y Jr Research Fellow Posts At Rajiv Gandhi Centre for Biotechnology Rajiv Gandhi Centre for Biotechnology (RGCB) invites applications to recruit on vacant...RNA-seq Analysis Workshop Course Materials
By Jit 2903 days agochagall.med.cornell.edu - RNAseq can be roughly divided into two "types": Reference genome-based - an assembled genome exists for a species for which an RNAseq experiment is performed. It allows reads to be aligned against the reference genome and significantly improves...Senior Research Fellow (SRF) Bioinformatics at AIIMS, India
DEPARTMENT OF BIOTECHNOLOGY ALL INDIA INSTITUTE OF MEDICAL SCIENCES NEW DELHI-110029 Requirement of Senior Research Fellow Applications are invited for the following vacancy under Research project entitled “Exploiting temporal transcription...AlignQC: A tool for assessing an alignment, and generating reports that are easy to share
By Jit 2868 days agowww.healthcare.uiowa.edu - Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and rarefraction curve analysis. The most basic analysis only requires a BAM file, and outputs a web browser...Bioinformatics Symposium
This 2 day symposium will focus on topics in the below mentioned areas. Experts from India and Japan in this fields will deliver lectures and contribute in discussions. This will provide an opportunity to the participants to interact and...Bioinformatics Jokes !!
By Jitendra Prajapati 3950 days ago Comments (2)Collection of few bioinformatics jokes !!snakepipes: A toolkit based on snakemake and python for analysis of NGS data
By Jit 2572 days agogithub.com - snakePipes are flexible and powerful workflows built using snakemake that simplify the analysis of NGS data. DNA-mapping* ChIP-seq* RNA-seq* ATAC-seq* scRNA-seq Hi-C Whole Genome Bisulfite Seq/WGBS (*Also available in...Essentials of Statistics and Data Analysis using R
Clinical Development Services Agency (CDSA) is an extramural unit of Translational Health Science and Technology Institute (THSTI), Department of Biotechnology, Ministry of Science & Technology, Government of India. CDSA has a national mandate...gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output
By Rahul Nayak 2333 days agogithub.com - gapFinisher is based on the controlled use of a previously published gap filling tool FGAP and works on all standard Linux/UNIX command lines. They compare the performance of gapFinisher against two other published gap filling tools PBJelly and...
