Jit
Enthusiast computational biologist with business dream !!!
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SPAdes hybrid genome assembly
Last updated 3024 days ago by Jit Comments (1)When you have both Illumina and Nanopore data, then SPAdes remains a good option for hybrid assembly - SPAdes was used to produce the B fragilis assembly by Mick Watson’s group. Again, running spades.py will show you the...Pre- or postdoctoral research fellowship in Structural Bioinformatics in Padova
University of Padova (URL: http://protein.bio.unipd.it/) A research fellowship is available at the BioComputing Laboratory, University of Padova (URL: http://protein.bio.unipd.it/). A highly motivated and creative candidate is sought to work on...jobTree based python wrapper to run the genome simulation tool suite Evolver
By Jit 3013 days agogithub.com - evolverSimControl (eSC) can be used to simulate multi-chromosome genome evolution on an arbitrary phylogeny (Newick format). In addition to simply running evolver, eSC also automatically creates statistical summaries of the simulation...Contract Faculty-Bioinformatics at Maulana Azad National Institute of Technology
Contract Faculty-Bioinformatics at Maulana Azad National Institute of Technology Job Description:F.No.11/10(1)/929 Qualifications: Candidates should have Ph.D. degree. If Ph.D. candidates are not available at least Post Graduate degree with...String graph based genome assembly software and tools !
By Rahul Nayak 3002 days agoIn graph theory, a string graph is an intersection graph of curves in the plane; each curve is called a "string". String graphs were first proposed by E. W. Myers in a 2005 publication.Yau Group
Yau Group are a new research group based at the Wellcome Trust Centre for Human Genetics and the Department of Statistics at the University of Oxford. Yau Group develops statistical and computational methods for the analysis of genomic datasets...MUMmer4: A fast and versatile genome alignment system
By Jit 2957 days agomummer4.github.io - MUMmer4, a substantially improved version of MUMmer that addresses genome size constraints by changing the 32-bit suffix tree data structure at the core of MUMmer to a 48-bit suffix array, and that offers improved speed through parallel processing...Associate Professor - Centre for Bioinformatics at Maharshi Dayanand University, Rohtak
ADVERTISEMENT No. PR-54/2013 No. of Posts and Specialization: 1(UR) Educational Qualification: (i) Good academic record with a Ph.D. Degree in the concerned /allied /relevant disciplines. (ii) The Ph.D. Degree shall be a mandatory...AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references
By Manisha Mishra 2883 days agogithub.com - AlignGraph is a software that extends and joins contigs or scaffolds by reassembling them with help provided by a reference genome of a closely related organism. Using AlignGraph AlignGraph --read1 reads_1.fa --read2 reads_2.fa --contig contigs.fa...NIT Calicut Faculty Jobs 2013 in Bioinformatics
NATIONAL INSTITUTE OF TECHNOLOGY CALICUT, KERALA NOTIFICATION FOR FACULTY RECRUITMENT – 2013 (Faculty openings in Technology, Science, Architecture and Management at NIT Calicut, Kerala) National Institute of Technology Calicut, Kerala,...
