Jit
Enthusiast computational biologist with business dream !!!
Our Sponsors
Related items
SqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
By BioStar 2118 days agogithub.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...Lorikeet: Strain resolver for metagenomics
By BioStar 699 days agogithub.com - Lorikeet is a within-species variant analysis pipeline for metagenomic communities that utilizes both long and short reads. Lorikeet utilizes a re-implementaion of the GATK HaplotypeCaller algorithm, performing local re-assembly of potentially...Bambus
By Jit 3580 days agowww.cbcb.umd.edu - Bambus 2.0, the second generation Bambus scaffolder available as an open source package. While most other scaffolders are closely tied to a specific assembly program, Bambus accepts the output from most current assemblers and provides the user with...MetaBAT: An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial...
By Jit 3378 days agobitbucket.org - MetaBAT, An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities Grouping large genomic fragments assembled from shotgun metagenomic sequences to deconvolute complex microbial communities, or metagenome...
Is reference genome necessary for gene expression study in transcriptome sequencing or for variant discovery in genome sequencing?
Rahul Agarwal 4706 days agoBarber pole worm , sheep pathogen sequenced !!!
By Rahul Agarwal 4658 days agoResearchers have uncovered essential information in the fight against drug resistance in worms.Encode sequencing data freely available to download and use for academic means
By Rahul Agarwal 4467 days ago Comments (3)genome.ucsc.edu - In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA, including modified histones and transcription factors, followed...Tsetse Fly Genome sequenced
By Rahul Agarwal 4424 days agohttp://www.sciencemag.org/content/344/6182/380
