Rahul Nayak
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Exploring RNA Sequence Analysis: Tools for Every Bioinformatician
By Neel 11 days agoThe bioinformatics landscape for RNA sequence analysis is vast, with tools catering to specific needs. Whether you’re studying coding RNAs, non-coding RNAs, or exploring RNA-protein interactions, the right tools can transform your data into...
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
Last updated 2604 days ago by Abhimanyu Singh Comments (1)kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rapid determination of read compatibility with targets) Software (C++) https://pachterlab.github.io/kallisto/ Sailfish Estimation of isoform abundances...DNA Nucleotide Counter
By Neel 2265 days agowww.dnabaser.com - DNA Nucleotide Counter is delivered in a DNA Baser package together with other free molecular biology tools. Download the package and double click it. The programs inside the package will be extracted to the destination folder (specified...Dahak: benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.
By BioStar 1720 days agogithub.com - Dahak is a software suite that integrates state-of-the-art open source tools for metagenomic analyses. Tools in the dahak software suite will perform various steps in metagenomic analysis workflows including data pre-processing, metagenome assembly,...Breeding Insight
By BioStar 1447 days agowww.breedinginsight.org - Breeding Insight at Cornell University will leverage recent improvements in genomics and open source informatics components, and in partnership with small breeding programs, will enable these programs to harness powerful digital...Bioinformatic tools for pathogens informatics at CVR
By Abhi 198 days agohttps://bioinformatics.cvr.ac.uk/software/Cytoscape
By Anjana 3137 days agohttp://www.cytoscape.org/ - Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network...I-PV: Interactive Protein Sequence Visualization
By Jit 2731 days agohttp://i-pv.org/ - I-PV is a interactive data visualization software designed for inspection of protein sequences and mutation information. It is mainly used for Genetics and Bioinformatics. So what exactly makes it standout? http://i-pv.org/ipv_recsankeyNetwork with networkD3
By Jit 2453 days agochristophergandrud.github.io - You can also create Sankey diagrams with sankeyNetwork. Here is an example using downloaded JSON data: https://en.wikipedia.org/wiki/Sankey_diagram
