Poonam Mahapatra
Bioinformatics Researcher
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Pango Lineage Analysis !
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Which Perl distribution should I choose for bioinformatics study : ActivePerl, Strawberry Perl, DWIM Perl, Citrus Perl ?
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Clean the FASTA file
By Jit 4754 days agoMostly FASTA file contain NNN characters, which can be replace by random A T G C character with this perl script. It also print the FASTA sequence name, N's counts, nucleotide count and percentage details at command prompt/standard output.
Perl One liner basics !!
Last updated 4156 days ago by Abhimanyu SinghPerl has a ton of command line switches (see perldoc perlrun), but I'm just going to cover the ones you'll commonly need to debug code. The most important switch is -e, for execute (or maybe "engage" :) ). The -e switch takes a quoted string of Perl...-
Frequent words problem solution by Perl
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ICRISAT is a non-profit, non-political organization that conducts agricultural research for development in Asia and sub-Saharan Africa with a wide array of partners throughout the world. Covering 6.5 million square kilometers of land in 55...Perl way to check if an array contains values
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By Jit 3196 days agosaliweb.readthedocs.io - The frontend is a set of Perl classes that displays the web interface, allowing a user to upload their input files, start a job, display a list of all jobs in the system, and get back job results. The main saliwebfrontend class must be...
