Jit
Enthusiast computational biologist with business dream !!!
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Rebaler: program for conducting reference-based assemblies using long reads.
By Jit 2881 days agogithub.com - Rebaler is a program for conducting reference-based assemblies using long reads. It relies mainly on minimap2 for alignment and Racon for making consensus sequences. I made Rebaler for bacterial genomes (specifically for the...Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
By Neel 2811 days agogithub.com - Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural advances that have proven successful...Bioinformatics Faculty at UNIVERSITY OF HYDERABAD
UNIVERSITY OF HYDERABAD (A Central University established by an Act of Parliament) Prof. C.R.Rao Road, P.O. Central University Campus, Gachibowli, Hyderabad - 500 046 Advt.No. UH/HR/Rectt-2015/02 dt. 12.10.2015 The University invites...NextDenovo: string graph-based de novo assembler for TGS long reads
By Jit 2407 days agogithub.com - NextDenovo is a string graph-based de novo assembler for TGS long reads. It uses a "correct-then-assemble" strategy similar to canu, but requires significantly less computing resources and storages. After assembly, the per-base error rate...SRF/JRF Biotechnology NRCPB - Delhi, Delhi
SRF/JRF job position in National Research Centre on Plant Biotechnology (NRCPB) JRF /1 Qualification : Master’s Degree in Biotechnology / life sciences with four years Bachelor’s Degree (or) Master’s Degree in Biotechnology / life sciences...Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
By Jit 2371 days agogithub.com - Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequencing reads. It does this with a deep convolutional neural network classifier, using many of the architectural advances that have proven successful in image classification. Unlike...Teaching Careers 2015 at Uttaranchal College of Science & Technology
Teaching, Non-teaching Careers 2015 Uttaranchal College of Science & Technology - Dehra Dun, Uttarakhand Teaching, Non-teaching Careers 2015 at Uttaranchal College of Science and Technology, Dehradun Below mentioned teaching and...SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis
By BioStar 2182 days agogithub.com - SHAMAN is a shiny application for differential analysis of metagenomic data (16S, 18S, 23S, 28S, ITS and WGS) including bioinformatics treatment of raw reads for targeted metagenomics, statistical analysis and results visualization with a large...Project Assistant II Jobs opportunity in National Chemical Laboratory (NCL) on temporary basis
No. Bio/NCIM/3 Project Assistant II Jobs opportunity in National Chemical Laboratory (NCL) on temporary basis Project Code No. : GAP312626 Title of the Project : Microbial ecology and distribution of geochemical cycling genes in an hot...FastProNGS: fast preprocessing of next-generation sequencing reads
By Rahul Nayak 2051 days agogithub.com - FastProNGS to integrate the quality control process with automatic adapter removal. Parallel processing was implemented to speed up the process by allocating multiple threads. Compared with similar up-to-date preprocessing tools, FastProNGS is by...
