Rahul Agarwal
I'm a Bioinformatician and Programmer
Our Sponsors
Related items
Flye: Fast and accurate de novo assembler for single molecule sequencing reads
By Rahul Nayak 1966 days agogithub.com - Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The...ngs-bits - Short-read sequencing tools
By Neel 1771 days agogithub.com - Binaries of ngs-bits are available via Bioconda. Alternatively, ngs-bits can be built from sources: Binaries for Linux/macOS From sources for Linux/macOS From sources for WindowsHASLR: a tool for rapid genome assembly of long sequencing reads
By LEGE 1757 days agogithub.com - HASLR is a tool for rapid genome assembly of long sequencing reads. HASLR is a hybrid tool which means it requires long reads generated by Third Generation Sequencing technologies (such as PacBio or Oxford Nanopore) together with Next Generation...Parliament2: Runs a combination of tools to generate structural variant calls on whole-genome...
By Jit 1638 days agogithub.com - Parliament2 identifies structural variants in a given sample relative to a reference genome. These structural variants cover large deletion events that are called as Deletions of a region, Insertions of a sequence into a region, Duplications of a...Smudgeplot: Inference of ploidy and heterozygosity structure using whole genome sequencing data
By Neel 1001 days agogithub.com - This tool extracts heterozygous kmer pairs from kmer count databases and performs gymnastics with them. We are able to disentangle genome structure by comparing the sum of kmer pair coverages (CovA + CovB) to their relative coverage (CovB / (CovA +...Ragan Lab
Computational systems biology Research Area: breast cancer; pancreatic cancer; prostate cancer; gastrointestinal disorders; urohaemolytic disorders; staphylococcal diseases33rd Annual Convention of Indian Association for Cancer Research from 13th to 15th February 2014
RGCB is organizing the 33rd Annual Convention of Indian Association for Cancer Research from 13th to 15th February 2014 with the theme "Discovery, Innovation and Translation in Cancer Research" Kindly log on to conference website...DNA Bending Propensity in the Presence of Base Mismatches: Implications for DNA Repair
By Jitendra Narayan 4113 days agoResearchers at Michigan State University use TACC supercomputers to understand DNA bending and repair mechanisms.Cancer Growth Animation
By Archana Malhotra 4081 days agoThis video demonstrates how cancer growth happens in human body.Paper test for cancer !!!
By Shruti Paniwala 3922 days agoAn Indian-American scientist at the Massachusetts Institute of Technology (MIT) has developed a cheap, simple, paper test that can detect cancer, circumventing expensive approaches such as mammograms and colonoscopy.
