BioStar
Bioinformatician
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PLAR: Pipeline for lncRNA annotation from RNA-seq data
By Abhi 1522 days agowww.weizmann.ac.il - Due to several requests, we are releasing an assingment of orthologs, determined using the same methods used in Hezroni et al. (BLAST, Whole Genome Alignment (WGA), and synteny). One is comparing human GENCODE genes (from GENCODE v30) to lncRNAs...Comparative genomics visualisation tools !
By Neel 1481 days agocmdcolin.github.io - Comparative genomics visualisation tools !The complete sequence of a human genome
By Neel 1438 days agowww.science.org - The completed regions include all centromeric satellite arrays, recent segmental duplications, and the short arms of all five acrocentric chromosomes, unlocking these complex regions of the genome to variational and functional studies.JBrowse 2: a modular genome browser with views of synteny and structural variation
By Abhi 1048 days agogithub.com - igvjs - a create-react-app with igv package from npm installed. the igv.js is instrumented to output "DONE" to the console when finished, and to have an increased fetchSizeLimit (which is otherwise git in CRAM longread tests) jb2-web - stock...When Chromosomes Shift: Understanding Chromosome Rearrangement and Human Disease
By BioStar 332 days agoIn the vast and complex world of genetics, our chromosomes are like carefully arranged bookshelves — each holding critical information that defines who we are. But what happens when those books are shuffled, inverted, or swapped? The answer lies in...Claus-Peter Stelzer Lab
Interested in various topics at the intersection of ecology and evolution. In my research I use rotifers as model organisms for experimental studies at the individual and population level. Rotifers are ideally suited for this, because populations of...Genome + Epigenome = New Understanding of the Pathogens in Your Food
By Jitendra Narayan 4546 days agoUC Davis's Bart Weimer describes foodborne pathogens and their proclivity for rapid genome rearrangement. The 100K Pathogen Genome Project he leads is using PacBio long-read sequencing to close genomes and analyze methylation; Weimer reports that...Bioinformatician duties and jobs !!!
By Jitendra Narayan 4387 days agoNeedle in a haystack ... ohh yes this is what bioinformatician do. We handle and analyse, Terabytes and Petabytes of genomic data on daily basis.How to sequence the human genome - Mark J. Kiel
By Rahul Nayak 4301 days agoView full lesson: http://ed.ted.com/lessons/how-to-sequence-the-human-genome-mark-j-kiel Your genome, every human's genome, consists of a unique DNA sequence of A's, T's, C's and G's that tell your cells how to operate. Thanks to technological...Nieduszynski Group
Complete, accurate replication of the genome is essential for life. All chromosomes in eukaryotic cells must be duplicated and then segregated to daughter cells to ensure genetic integrity and produce the large number of cells that make up a...
