Rahul Nayak
A Bioinformatician
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Scaffolding of a bacterial genome using MinION nanopore sequencing
By Rahul Agarwal 3426 days agowww.nature.com - Second generation sequencing has revolutionized genomic studies. However, most genomes contain repeated DNA elements that are longer than the read lengths achievable with typical sequencers, so the genomic order of several generated contigs cannot...SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology
By Abhimanyu Singh 2740 days agoufmg-simba.sourceforge.net - SIMBA, SImple Manager for Bacterial Assemblies, is a Web interface for managing assembly projects of bacterial genomes. SIMBA was created to assist bioinformaticians to assemble bacterial genomes sequenced with NextGeneration Sequencing (NGS)...MetaSim A Sequencing Simulator for Genomics and Metagenomics.
By Jit 2545 days agoab.inf.uni-tuebingen.de - Our software can be used to generate collections of synthetic reads that reflect the diverse taxonomical composition of typical metagenome data sets. Based on a database of given genomes, the program allows the user to design a...Scientist Bioinformatics Positions
Bioinformatics-Multi_Omics_Integration https://www.researchgate.net/job/939073_Senior_Scientist_Bioinformatics-Multi_Omics_Integration Senior_Scientist_Bioinformatics-Transcriptomics_Analysis...FiNGS: Filters for Next Generation Sequencing
By Neel 1365 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...Compressive Genomics
Started by Rahul Agarwal 4121 days agoThe key to finding a solution is to notice that most genomicsequences differ by very little. It may well be that the number of complete genome sequences being stored is increasing rapidly, but the actual amount of new data is very small. In...Precision Medicine
By Rahul Agarwal 4108 days agowww.cbsnews.com - Coupling established clinical–pathological indexes with state-of-the-art molecular profiling to create diagnostic, prognostic, and therapeutic strategies precisely tailored to each patient's requirements — hence the term “Precision...Bioinformatics market in India
By Rahul Agarwal 4109 days agowww.kenresearch.com - Key Topics Covered in the Report: The market size of the Indian Bioinformatics Industry , FY’2007-FY’2013 Market segmentation of India bioinformatics industry by application by sectors, FY’2007-FY’2013 Market...Introduction of Epigenomics
By Rahul Agarwal 4065 days agowww.genome.gov - What is the epigenome? What does the epigenome do? What makes up the epigenome? Is the epigenome inherited? What is imprinting? Can the epigenome change? What makes the epigenome change? How do changes in the epigenome contribute to...
