To decide which strategy should be our “preferred” genome assembly approach based on data rather than my gut-feeling about the “best assembly” I decided to do some testing with a known “true” reference E Coli K12 MG1655
github.com - Dahak is a software suite that integrates state-of-the-art open source tools for metagenomic analyses. Tools in the dahak software suite will perform various steps in metagenomic analysis workflows including data pre-processing, metagenome assembly,...
help.rc.ufl.edu - More at https://help.rc.ufl.edu/doc/Kmer
This also includes:
A2Amapper: ATAC, Assembly to Assembly Comparision tool:
Comparative mapping between two genome assemblies (same species), or between two different genomes (cross...
There are numerous genome assembly tools available, each with its strengths and weaknesses. Here is a list of some widely used genome assembly tools as of my last update in September 2021:
SPAdes: An assembler specifically designed for...
Bioinformatics Courses around the world
Here is the list Bioinformatics courses offered around the world. Reasons for constructing this page are:
To show the extent of growth of this new discipline
To provide a resource for students, and...
The real bioinformatics scope lies if there are research labs which work in this field. One has to take account of that. If so then try to get information of those labs and visit them to get a hang of the work they pursue. For detail...
Assistant Professor job recruitment in University of Pune on temporary basis
No. of Post : 01
Department : Institute of Bioinformatics and Biotechnology
Qualification : (i) Good academic record as defined by the concerned University with...
The Department of Agronomy at National Taiwan University, Taipei, Taiwan,
invites applications for two full-time faculty positions beginning August
1, 2021 at the rank of Assistant Professor, Associate Professor or
Professor in Biometry and...
ADVT. NO. PR-28 of 2018
Online applications are invited from eligible & interested candidates for the following Teaching/Non-Teaching posts. Applications must be submitted online from 10.4.2018 to 30.4.2018 through the link available on the...