How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you nee...ormatician) using both manual and CPAN method.When a Perl modul...le: Go to CPAN Search website and search for the module that yo...ssing parameters...CPAN build and ca...e to SamTools library for DNA sequencinglibbiojava-java - Java API to...3968 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computatio...step is the most crucial part and believe to be the biggest bot...open We generally think free and cheap are useless. But this c...is not available to everyone and your data can’t be validat...ticularly true in the case of genome ass...3726 days ago
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3963 days ago
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Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways ...s I used Matlab, SAS, SPSS, R and severa...Matlab had a lot of powerful tools and was easy to use, whereas SPSS is...nformatics work that is math heavy and deals with a large amount of data.3970 days ago
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BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.Bi...ersity(Bioinformatics Center) and the Open Bio Foundation. The pro...ect was started in late 2000, and is sti...3965 days ago
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UK Genome Science Meeting, sept 2nd-4th, 2013
Following the success of the last three years' UK Next Gen Sequencing meetings at Nottingham, the newly named UK Genome Scienc...ts from around the world to meet and discuss the current and future state of all aspects and applications of Next Generation Sequencing. More at >> http:...3937 days ago
Structural polymorphism analysis from NGS data
...ship project aiming at understanding and improving the adaptive capaci...of the comparison of multiple and diverse genomes of a same species and of the...construction of pan- and core-genomes. These challenging tasks wil...has computational facilities and expertise in NGS data analysis, and...3967 days ago
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Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, nam...oj Munna Bhai Promoter Gene se Genome tak...aju ban gaya Genefinder. Har Ligand jo dock karega. Alignment to ho...ra Naam Tool Developer Hum Apke Genome Mein Rehte Hein Do Sequence Baarah Hit Tera Ligand Chal G...3937 days ago
What a bioinformatician always dream for ???
Well established bioinformatics labs with SGI(silicon graphics interf...all commercial softwares. Complete, and fully assembled genome of...l :P A girl/boy with lesser E-values and higher compatibility score. Hor...ions. Licence to almost all genomics and proteo...3863 days ago
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Dat...seen an exponential increase in genomic and biomed...orithms, including spectral graph theory and mo...res, can be used to attack challenges in sequencing, medical genomics and biologi...3920 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode...contains genetic information, and this is called the genome. But the amount of informatio...erved between species. If the genome is considered as a long text,...mutations that cause cancer, and the genome of the natto producti...3935 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https:/...eqs)) from Bio import Entrez allseq = {} for x in seqs: if 'gene-region' in x and x['gen...1154 days ago
Download genome using NCBI esearch command line !
#Download using command line "NC_005956.1" / "CP003784.1" esearch -db nucleotide -query "NC_005956.1" | efetch -format fasta > seq1.fa esearch -db nucleotide -query...1119 days ago
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome projects, next generation sequencing and other 'omics' techniques. Bioinformatics provides the tools to analyse and...3434 days ago
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?3215 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TU...own, there are highly diverse and complex biological questions...issue, lymph node metastasis, and blood samples taken from the sam...a result, it provides strong and flexib...2380 days ago
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