Results for "Extending"
Blogs
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and short indels. Struc...2730 days ago
Bookmarks
- PERGA - Paired End Reads Guided Assembler PERGA is a novel sequence reads guided de novo assembly approach which adopts greedy-like prediction strategy for assembling...
2189 days ago
Many-to-many pairwise alignments of two sequence sets
...score where the score of an alignment is equal to the sum of the matches taken from the scoring matrix, minus penalties arising from opening and extending gaps in the aligned sequences...2175 days ago
- +6 more Bookmarks
Pages
Bio++ : C Language libraries for your biological need
...guage, yet sufficiently abstract and fluent to describe algorithms and interactions in a wide variety of environments. C++ has its basis in C - extending it by supporting features mea...3975 days ago
Awesome perl frameworks, libraries and software - PART 2
...esters/Test-Reporter - (Perl) Sends perl module test results to CPAN Testers CpanelInc/Custom-cPanel-Module - Example Perl module for extending the cPanel API cosimo/perl5-...2522 days ago
Top-level pages
List of Bioinformatics Software Tools for Next Generation Sequencing
...a flexible visualization method. We leveraged the ANNOVAR (Wang et. al, 2010) framework for assigning functional impact to genomic variations by extending its list of reference annotat...2936 days ago
Genome Assembly Tools and Software - PART1 !!
...iDe – novel Assembler The StriDe Assembler integrates string and de Bruijn graph by decomposing reads within error-prone regions, while extending paire-end read into long read...2713 days ago
- +1 more Top-level pages
Opportunity posts
Graduate research assistantships @ University of Nebraska-Lincoln (UNL)
...models, polygenic modeling of binary traits, reexamining the results from quantitative genetics analysis in light of functional annotation, and extending kernel methods (such as GBLUP...3511 days ago
Bio-Scripts
Tadpole is 250x faster than SPADes assembler !
...in=libA_r1.fq,libA_merged.fq in2=libA_r2.fq,null extra=libB_r1.fq out=ecc_libA_r1.fq,ecc_libA_merged.fq out2=ecc_libA_r2.fq,null mode=correct Extending contigs with reads could be d...1004 days ago
- ...[File In] default = stdin -A Multiple Hits window size (zero for single hit algorithm) [Integer] default = 40 -f Threshold for extending hits [Integer] default =...
978 days ago
Comments
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...pq < INT, read will be called unmapped. [1] --extcigar - Use the extended CIGAR format for output alignments. [false] --no-end2end - Disables extending of the alignments to the ends...2320 days ago
