List of gene ontology software and tools
...DAVID : Gene Functional Classification (Laboratory of Immunopathogenesis and Bioinformatics, NIAID) The Functional Classification Tool provides a rapid means to organize large lists...3752 days ago
Computer simulation of genetic mechanism !!
...Study Designs http://www.rannala.org/?page_id=241 GENOME A rapid coalescent-based whole genome...s. https://sourceforge.net/projects/gensim/ GWAsimulator A rapid whole genome simulation progr...3018 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard softw...2973 days ago
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Genome Assembly Tools and Software - PART2 !!
... is a probabalistic framework for determining the likelihood of an assembly given the data (raw reads) used to assemble it. It allows for the rapid discovery of errors and compa...2728 days ago
Awesome perl frameworks, libraries and software - PART 4
...syntax for mojo epl templates in Mojo projects tseemann/prokka - Rapid prokaryotic genome annotation...vmware_esx - chech_vmware_esx Fork of check_vmware_api.pl vanstyn/RapidApp - Turnkey ajaxy webap...2537 days ago
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Useful Publications and Websites for Deep Sequencing Data Analysis
...Res 19(6):1068-76, 2009. Full Text Multiplexed shotgun genotyping for rapid and efficient genetic mapping...:610-7, 2011. Full Text Restriction-site Associated DNA (RAD) markers Rapid SNP discovery and genetic map...3822 days ago
Accelerating Biology 2014:The Next Wave (18-22 February, 2014)
New advances in biology are being made at a rapidly increasing pace, largely due to new technologies and a...ng technology enables sequencing of hundreds of genomes at an extremely rapid rate and at a significantly l...3888 days ago
An Explosion Of Bioinformatics Careers
...ioinformatics and the identification, compilation, analysis, and visualization of huge amounts of biological and health care information. With the rapid development of new tools to m...3648 days ago
2013 NextGen Genomics & Bioinformatics Technologies (NGBT) Conference, New Delhi, INDIA
...and disease. Also, this has made possible the growth of microbial, animal and plant genomics studies. While the data production has increased at a rapid pace challenges remain in ana...3965 days ago
Human Genome Meeting 2014, Geneva, Switzerland
The spectacular advances of the last few years resulted in the rapid analysis of the genome sequence of each individual. The biomedical world is now faced with the enormous challenge...3923 days ago
Genome + Epigenome = New Understanding of the Pathogens in Your Food
UC Davis's Bart Weimer describes foodborne pathogens and their proclivity for rapid genome rearrangement. The 100K Pathogen Genome Project he leads is using PacBio long-read sequenci...3916 days ago
Script to rapid genome clustering based on pairwise ANI
First, create a blast+ database: makeblastdb -in -dbtype nucl -out Next, use megablast from blast+ package to perform all-vs-all blastn of sequences: blastn -quer...678 days ago
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Comment on "Installing Porechop on Ubuntu !"
...ta1,634,477 reads loaded Looking for known adapter sets10,000 / 10,000 (100.0%) Best read Best start read end Set %ID %ID SQK-NSK007 96.6 81.8 Rapid 66.1 0.0 SQK-MAP006 80.0 82.6...2149 days ago
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