Results for "metric"
Blogs
Software and Tools to detect structure variation with long reads !!
...alling user interface with built-in cluster compute support Small indel calling (2-49 bp) Improved inversion calling (screenInversions) Quality metric for SV calls based on number...2631 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...tigs. Any mis-assemblies can occur. Mis-assembly checking and assembly metric tools:QUAST - Quality assessm...ent tool for genome assembly http://bioinf.spbau.ru/quastMauve assembly metrics - http://code.google.com/p/n...1228 days ago
Bookmarks
QuasiModo - Quasispecies Metric Determination on Omics
This repository contains the scripts and pipeline that reproduces the results of the HCMV benchmarking study. In this study we evaluated genome assemblers and variant c...1067 days ago
auN: a new metric to measure assembly contiguity
Given a de novo assembly, we often measure the “average” contig length by N50. N50 is neither the real average nor median. It is the length of the...666 days ago
Pages
Genome Assembly Tools and Software - PART2 !!
...respect to the assembly and a statistical model which can be used as a metric for evaluating assemblies. F...dash; Assembly Analysis FrameworkGAEMR (Genome Assembly Evaluation Metrics and Reportin) is a complete...2709 days ago
Awesome perl frameworks, libraries and software - PART 2
.../perl5-net-statsd - Net::Statsd is a Perl client for Etsy's statsd metric collection daemon chromatic/...n-mogilefs - Perlbal Plugin to serve data from MogileFS UUPharmacometrics/PsN - Perl-Speaks-NONME...2518 days ago
Top-level pages
List of Bioinformatics Software Tools for Next Generation Sequencing
...Description: Combined Annotation Dependent Depletion; tool for scoring SNV deletions/insertions; “integrates multiple annotations into one metric”; Score strongly correl...2932 days ago
- ...eration sequencing, and are used to represent multiple types of quality metrics, including quality of base c...the base was called incorrectly. Scores use a Phred-scaled probability metric. For example, a Phred Q score...
2892 days ago
Comments
Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
...html In stastistical language war, a/c to this metric, R wins TYPE OF STAT...A SPSS Nonparametric Tests Yes &n... Yes Nonparametric Smoothing Methods ...3575 days ago
