Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
...l % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed100 11.4M 100 11.4M 0 0 509k 0 0:00:23 0:00:23 --:--:-- 558k(base) [jnarayan@hn1 TOOLS]$...932 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...nbsp;(1.452 :: 1.465) Algorithms for Molecular Biology (1.463 :: 2.155) IEEE-ACM Transactions on Co... (1.436 :: 1.605) Bulletin of Mathematical Biology (1.389 :: 1.553) Computers in Biology and B...1156 days ago
Comment on "Installing Bio::SCF perl module"
jit@jit-HP-Pro-3335-MT:~/Downloads$ sudo cpan -T install Bio::SCP[sudo] password for jit: Loading internal null logger. Install Log::Log4perl for logging messagesReading '/home/jit/.cpan/Metadata' Database was generated on Fri, 13 Mar 2020 03:55:17 GMTinstall is up to date (0.01).1494 days ago
Comment on "Setting up autoConTAMPR !"
...libc-bin (2.19-0ubuntu6.14) ...Removing intermediate container 7adc9dbdb955 ---> 1ca0a9d66656Step.............. okt/50_utf8.t .............. okt/51_utf8.t .............. okt/55_combi.t ............. okt/60_...1494 days ago
Comment on "NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore"
...53A%2F20200203%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20200203T053558Z&X-Amz-Expires=300&X...53A%2F20200203%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20200203T053558Z&X-Amz-Expires=300&X...1605 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...nbsp;(1.452 :: 1.465) Algorithms for Molecular Biology (1.463 :: 2.155) IEEE-ACM Transactions on Co... (1.436 :: 1.605) Bulletin of Mathematical Biology (1.389 :: 1.553) Computers in Biology and B...1894 days ago
Comment on "Installing Porechop on Ubuntu !"
...rward) 75.0 76.9 Barcode 51 (forward) 76.0 76.0 Barcode 52 (forward) 76.9 79.2 Barcode 53 (forward) 76.0 76.9 Barcode 54 (forward) 76.9 80.0 Barcode 55 (forward) 79.2 77.8 Barcode 5...2158 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...CMD INSTALL poRe_0.16.tar.gz The fastq extraction scripts for poRe are in github, so let’s go get those: git clone https://github.com/mw55309/poRe_scripts.git We wil...2226 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...ker_pipeline::748.729*17.18] mapped 55098 sequences[M::worker_pipeli...ker_pipeline::899.174*17.66] mapped 55252 sequences[M::worker_pipeli...er_pipeline::2271.864*18.14] mapped 55098 sequences[M::worker_pipeli...er_pipeline::3569.479*18.57] mapped 55836 sequences[M::worker_pipeli...2333 days ago
Comment on "Does anyone have Nanopore latest updates?"
Improved data analysis for the MinION nanopore sequencer http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3290.html A complete bacterial genome assembled de novo using only nanopore sequencing data http://biorxiv.org/content/early/2015/02/20/0155523409 days ago