Tools to detect synteny blocks regions among multiple genomes
...to be an efficient and accurate automated tool for defining HSBs using datasets that may contain minor errors resulting from limitations in map construction methodologies. CoGe (http://...2650 days ago
String graph based genome assembly software and tools !
...not rely on de Bruijn graphs, and instead employs a different graph construction approach called ‘string...This paper describes the String Graph concept. ii) Efficient construction of an assembly string graph u...2369 days ago
10 NGS services companies around the globe !
...transcriptomics, metagenome, and epigenome sequencing. The company also provides a variety of services such as oligo synthesis, database construction, genome research, and bioserv...1299 days ago
Bioinformatics tools for telomere to telomere assembly !
...ering, comparing, and annotating structural variant (SV) calls in VCF format (Aaron Wenger)● JumboDB – tool for de Bruijn graph construction (Anton Bankevich @AntonB...1032 days ago
Ancient whole genome duplication (WGD) detection tools !
...fasta.blast.tsv.mcl For more reading - There are 9 sub-modules in WGD kde: KDE fitting to the Ks distribution ksd: Ks distribution construction mcl: BLASP comparison of All...1195 days ago
Useful Bioinformatics Analysis Tools !
...ckProbs Multiple sequence alignment designed especially for GPU. • Gudys, A., Deorowicz, S., QuickProbs 2: towards rapid construction of high-quality alignments of...903 days ago