10 NGS services companies around the globe !
...ng bioservices tools, pipelines and workflows, compute resources, data analysis reports, and case studies. GA...igo synthesis, database construction, genome research, and bioservices analysis system consulting services. M...1301 days ago
Bioinformatics tools for telomere to telomere assembly !
...ftware designed for processing Iso-Seq data and other long-read transcriptome data (Richard Kuo @GenomeRIK)● pbaa (PacBio Amplicon Analysis) – separates complex mi...1033 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...gi/FIG/RapidAnnotationServerJCVI Annotation Service - http://www.jcvi.org/cms/research/projects/annotation-service/ Frequent command use for the analysis are at: https://bioinformati...1246 days ago
Ancient whole genome duplication (WGD) detection tools !
...D detection, one is collinearity analysis, and the other is based on th...e have posted articles about the analysis process of WGD. I searched fo...irst conda activate wgdstart our analysis environment, and then start t...All-vs-ALl + MCL classification analysis. mix: Hybrid modeling of Ks...1197 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener J, Ferns B, Goulder P, Nastouli E, Keane JA, Kellam P, Otto TD. Bioinformatics. 2015...1088 days ago
Illumina based assembly pipeline steps !
...data || BCFTools, BEDTools; default for metagenomics data) Variant annotation (SnpEff, SnpSift) Consensus assessment report (QUAST) Lineage analysis (Pangolin) Clade assignment,...918 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. • Kawulok, J., Deorowicz, S., CoMeta: Classification of Metagenomes Using k-...905 days ago
List of comparative genomics resources !
...whole genomes Conduct comparative biometric analysis of chromosomes of different o...al Genomes/Metagenomes A data management and analysis system for metagenomes I...one programs of phylogenetic and evolutionary analysis. PhyloPat -- the phyloge...718 days ago
Tools for Differential expression analysis
apeglm - https://bioconductor.org/packages/release/bioc/html/apeglm.html ashr - https://github.com/stephens999/ashr, https://cran.r-project.org...585 days ago
Interesting Bioinformatics Resources !
...rect.com/science/article/pii/S2666389921002300 4. A Reproducible Data Analysis Workflow with R Markdown, Git...producibility of computational workflows is automated using continuous analysis https://www.nature.com/a...582 days ago