Five unique traits of effective computational biologist
...al keywords into a search engine or posting a question at Stack Overflow or the BioStars forums. I have entered problems into search engines that generate no results, and every questio...3994 days ago
The 5 reasons to mistakes at bioinformatics work !!!
...t all are interdependent and need proper configuration. I face the same kind of problem with Evolver :( … 4.Folders missing: The pipelines generate lots of data, and we keep the...2150 days ago
Computer simulation of genetic mechanism !!
...ART ART is a set of simulation tools to generate synthetic next-generation seq...mbs modifying Hudson's ms software to generate samples of DNA sequences with...IMLA SIMLA is a SIMuLAtion program that generates data sets of families for us...3019 days ago
String graph based genome assembly software and tools !
...mes. 4. BASE https://github.com/dhlbh/BASE It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high...2373 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for DNA and RNA sequencing. Each consumable flow cell can now generate 10–20 Gb of DNA sequence data. Ultra-long read...2364 days ago
BBTools for bioinformatician !
...adump=f mincount=10 k=20 rcomp=f This will generate a file containing the counts...----------------------------Randomreads.sh Generate random reads in various forma...------------------------------Pileup.sh To generate transcript coverage stats...2315 days ago
Installing Bandage on Ubunty !
...l in the Bandage directory. Set the environment variable to specify that you will be using Qt 5, not Qt 4: export QT_SELECT=5 Run qmake to generate a Makefile: qmake Build...2233 days ago
Bioinformatics tools for telomere to telomere assembly !
...@GenomeRIK)● pbaa (PacBio Amplicon Analysis) – separates complex mixtures of amplicon targets from genomic samples to cluster and generate high-quality consensus sequen...1036 days ago
List of comparative genomics resources !
...on adaptive evolution in gene families of higher plants and chordate. The CGView Server -- a comparative genomics tool for circular genomes Generate graphical maps of circular ge...721 days ago
Steps to find palindrome in genomes !
...omic regions can be identified. Next-generation sequencing: High-throughput sequencing technologies, such as PacBio and Oxford Nanopore, can generate long reads that can span enti...467 days ago