Tools to detect synteny blocks regions among multiple genomes
...ns surrounding genes in gene families. MicroSyn searches for conserved, flanking colinear homologous gene pairs between two genomic fragments to determine the relationship between two...2662 days ago
List of gene ontology software and tools
...ne the functional properties of all genes/probes in a microarray data set, and then applies a cumulative hypergeometric distribution analysis to determine if any statistically signific...3761 days ago
How to install Perl modules on Mac OS X in easy steps !!
...OS X and deploying on Red Hat, for instance. Moreover, Fink doesn’t seem to make every module available, and it’s not very easy to determine which Fink package you need t...2805 days ago
List of motif discovery tools !
...ine, or tyrosine phosphorylation. PNU -- Protein Naming Utility Determine correct names for proteins....fs. SDPpred -- A Tool for Prediction of Amino Acid Residues that Determine Differences in Functional Spe...2045 days ago
Protocol for De novo Genome Assembly using Illumina Reads
.../quality trimming. Choose an adequate parameter set for assembly. Assemble the data into scaffolds/contigs. Examine the assembly performance and determine the efficiency of the assembl...1256 days ago
Run bash script in Perl program !
...alienomics', is written in Perl. Often it's a major problem for beginners to execute certain Unix/shell commands in Perl script, so it's hard to determine which feature is unique to a...689 days ago
Calculate the significance of the difference between two trends
...pecific test you choose, but it will generally compare the difference in means between the two trends to the variability within each trend. Determine the p-value associated with t...470 days ago
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