Tools to detect synteny blocks regions among multiple genomes
...here have been various algorithms developed to identify the conserved homologous synteny blocks (HSB) amongst...species. It is intended to help scientists study and analyze synteny, homologous genes and other conserved ele...2653 days ago
Structural variation: the hidden genomic treasure
...nerated by several different mechanisms including non‐allelic homologous recombination, non‐homologous end‐joining and deoxyribonucl...ariants can arise by several mechanisms, including nonallelic homologous recombination (NAHR), nonhomo...2745 days ago
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List of motif discovery tools !
...parison Conduct exhaustive intermediate profile searches of a set of homologous protein sequences. HotSp...ng matrix. PPISearch -- Protein-Protein Interaction Search Find homologous protein-protein interactions...2036 days ago
Ancient whole genome duplication (WGD) detection tools !
...ronment, and then start the analysis Step 1 : Use to wgd mclidentify homologous genes in the genome wgd mc...l mcl, ksd and syn wf2: Ks standard analysis procedure of one-vs-one homologous gene (ortholog), call wcl and...1198 days ago
List of comparative genomics resources !
...MamPol -- a database of nucleotide polymorphism in the Mammalia class Conduct single nucleotide polymorphisms diversity measurements among homologous sequences from the Mammalia c...720 days ago