Results for "Retrieving"
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HOMER: Software for motif discovery and next-gen sequencing analysis
...e which is important to know before diving head first into more advanced analysis tools such as HOMER. Setting up your computing environment Retrieving and storing sequencing files&...2981 days ago
GeneProf: analysis of high-throughput sequencing experiment
...rkflow framework (cp. Section 'Module Development: Adding new..') and data from GeneProf may be used externally (cp. Section 'Web API: Retrieving Data from ..'). Ge...2546 days ago
MGERT: Mobile Genetic Elements Retrieving Tool
MGERT is a computational pipeline for easy retrieving of MGE's coding sequences of a particular family from genome assemblies. MGERT utilizes several established bioinformatic tools combined into single pipeline which hides different technical quirks from an inexperienced user.1864 days ago
Retrieving Taxonomic Information with R
This vignette will introduce users to the retrieval of taxonomic information with myTAI. The taxonomy() function implemented in myTAI relies on t...1761 days ago
BlobToolKit: A toolkit for genome assembly QC
...nbsp;BlobTools2 and the Viewer. The BlobToolKit Pipeline is a configurable Snakemake pipeline that automates all steps from retrieving public datasets through runni...1585 days ago
SqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
...s in each metagenome Co-assembly of a large number of metagenomes via merging of individual metagenomes Includes binning and bin checking, for retrieving individual genomes The resul...1407 days ago
PhyloHerb: A highâthroughput phylogenomic pipeline for processing genome skimming data
...with lower quality data. Examples include low-coverage (5x cpDNA) plastome phylogeny, recycling plastid genes from target enrichment data, retrieving low-copy nuclear genes from m...292 days ago
PhyloHerb: Phylogenomic Analysis Pipeline for Herbarium Specimens
...with lower quality data. Examples include low-coverage (5x cpDNA) plastome phylogeny, recycling plastid genes from target enrichment data, retrieving low-copy nuclear genes from m...124 days ago
