2893 days ago
2527 days ago
KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
...ing kmer counts. The following tools are currently available in KAT: hist: Create an histogram of k-mer occurrences from a sequence file. Adds metadata in output for easy plotting....2033 days ago
1511 days ago
ncbi-datasets-cli -- Quickstart: command line tools !
...at . Use datasets to download biological sequence data across all domains of life from NCBI. Use dataformat to convert metadata from JSON Lines for...932 days ago
Corona Virus Genome and Data Download !
Genes and its related metadata could be found on https://www.ncbi.nlm.nih.gov/datasets/coronavirus/genomes/926 days ago
bacLIFE: an automated genome mining tool for identification of lifestyle associated genes
...es the genes of every input genome Lifestyle prediction Employs a machine learning model to forecast bacterial lifestyle or other specified metadata Analitical module (Shiny app...103 days ago
MetaGraph: Ultra Scalable Framework for DNA Search, Alignment, Assembly
...ich are then merged into a joint metagraph index. Each input sample is annotated in the joint index as a subgraph. This graph index enriched with metadata can then be used for downstre...17 days ago