Many-Core Engine (MCE) for Perl example
...information orderly with zero involvement by the manager process while running. MCE MODELS The models ta...REMENTS Perl 5.8.0 or later. PDL::IO::Storable is required in scripts running PDL. SOURCE AND FURTHER READ...2695 days ago
fineSTRUCTURE v2 & GLOBETROTTER
Software available at this site FineSTRUCTURE version 2, a pipeline for running ChromoPainter and FineSTRUCTURE for population inference. A GUI is available for interpretation. D...2681 days ago
TULIP - The Uncorrected Long read Itegration Pipeline
#Running TULIP (The Uncorrected Long-read Integration Process), version 0.4 late 2016 (European eel) TULIP currently consists of to Perl scripts, tulipseed.perl and tul...2398 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
...multi-core processors and uses a small RAM footprint, Ready to be used on desktop computer, cluster, cloud as well as within distributed system running Hadoop. https://plast.inri...2391 days ago
jobTree based python wrapper to run the genome simulation tool suite Evolver
...ution on an arbitrary phylogeny (Newick format). In addition to simply running evolver, eSC also a...and image files. Also included are convenience scripts to: check on a running simulation and see detailed s...2383 days ago
Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data management features that allow the user t...2353 days ago
DendroPy: a Python library for phylogenetic computing
...uirements and Installation DendroPy 4.x runs under Python 3 (all versions > 3.1) and Python 2 (Python 2.7 only). You can install DendroPy by running: More information is...2248 days ago
MITObim - mitochondrial baiting and iterative mapping
...torials for how to run MITObim and I encorage you to give them a try with the testdata that comes with this Repo, just to make sure everything is running smoothly on your system. It'l...2233 days ago
1580 days ago
LSC :a long read error correction tool
...g Started These simple steps will help you integrate LSC into your transcriptomics analysis pipeline. Read the LSC_requirements for running LSC. Download and set-u...2147 days ago