2143 days ago
FinisherSC:a repeat-aware tool for upgrading de novo assembly using long reads
Here is the command to run the tool: python finisherSC.py destinedFolder mummerPath If you are running on server computer and would like to use multiple threads, th...2137 days ago
Hercules: a profile HMM-based hybrid error correction algorithm for long reads
...vo assembly, fusion and structural variation detection. In such cases researchers often combine both techn...long read are covered with short reads. Availability: Hercules source code is available at https://github....2137 days ago
CoLoRMap: Correcting Long Reads by Mapping short reads
Second generation sequencing technologies paved the way to an exceptional increase in the number of sequenced geno...that CoLoRMap compares well with existing hybrid correction methods.The source code o...2137 days ago
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SKESA: strategic k-mer extension for scrupulous assemblies
...d multiple times with the same or different compute resources. Source code for SKESA is freely available at https://github.com/ncbi/SKESA/releases. Research Paper @ Link SKESA algo...2051 days ago
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