2505 days ago
Mulan: MUltiple sequence Local AligNment and conservation visualization tool
...It combines refine and tba tools to align either "draft" or "finished" quality sequences. Mulan provides a dynamic graphical interface to align and visualize conser...2499 days ago
LIBSVM -- A Library for Support Vector Machines
...ields to easily use SVM as a tool. LIBSVM provides a simple interface where users can easily link i...nbsp;CLISP, Haskell, OCaml, LabVIEW, and PHP interfaces. C# .NET code and&...2486 days ago
CHSMiner: a GUI tool to identify chromosomal homologous segments
...s based on shared gene content alone. It implements fast greedy search algorithm and rigorous statistical validation, and its friendly graphical interface allows interactive visualizat...2378 days ago
Taxoblast : Taxoblast is a pipeline to identify contamination in genomic sequence
...g the detection of foreign DNA sequences an important part of analysis pipelines. Here we use Taxoblast, a simple pipeline with a graphical user interface, for the post-assembly detect...2373 days ago
DRAWID: user-friendly Java software for chromosome measurements and idiogram drawing
"DRAWID has number of advantages including a user-friendly interactive interface, possibility for simultaneous chromosome and FISH/GISH/banding signal measurement and idiogram drawing...2369 days ago
Bandage: interactive visualization of de novo genome assemblies
...h it by moving nodes, adding labels, changing colors and extracting sequences. BLAST searches can be performed within the Bandage graphical user interface and the hits are displayed as...2362 days ago
Building Web UIs With Mojolicious Perl
...Dancer (Official site) Dancer2 Gantry - Web application framework for mod_perl, cgi, etc. Kossy - A Web framework with simple interface. Mojolicious - An all i...2340 days ago
Seal: SEquence ALignment evaluation suite
...ng alignment tools to the genome and the reads through a standardized interface. Parsing the output of the a...pped. Computing run times and measures of accuracy. Seal has interfaces to evaluate the following so...2332 days ago
Frontend: Perl Web framework documentation - Andrej Sali Lab
The frontend is a set of Perl classes that displays the web interface, allowing a user to upload their input files, start a job, display a list of all jobs in the system, and get back...2327 days ago