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A guide to machine learning for biologists
...s been an increase in the application of machine learning in biology to create useful and predictive models...ew fundamental machine learning techniques, including the most recently created and frequently used deep neu...887 days ago
GToTree: a user-friendly workflow for phylogenomics
GToTree is a user-friendly workflow for phylogenomics intended to give more researchers the capability to create phylogenomic trees. The open-access Bioinformatics Journal publication is available here, and documentation and examples can be found at the wiki here.830 days ago
CrowdGO: Machine learning and semantic similarity guided consensus Gene Ontology annotation
...CrowdGO snakemake workflow is currently only tested on Ubuntu. It should work on OSX, but please report any errors to maarten.reijnders@unil.ch or create an issue. https://journals.p...738 days ago
- Kablammo helps you create interactive visualizations of BLAST results from your web browser. Find your most interesting alignments, list detailed parameters for each, and export a publication-ready vector image, all without installing any software.
600 days ago
- https://dbikard.github.io/genomenotebook/ Install pip install genomenotebook How to use Create a simple genome browser with a search bar. The sequence appears when zooming in....
409 days ago
JBrowse 2: a modular genome browser with views of synteny and structural variation
igvjs - a create-react-app with igv package from npm installed. the igv.js is instrumented t...se-web v1.7.5 jb1 - stock instance of jbrowse 1 v1.16.11 jb2 embedded - a create-react-app with @jbrowse/react...404 days ago
Creating Genetic Maps from GBS data
...known parents and examining their progenies. These kinds of crosses to create specific group of individuals...ata collected from a Recombinant Inbred Line (RIL) (through selfing) to create a genetic map.268 days ago
- PPanGGOLiN (Gautreau et al. 2020) is a software suite used to create and manipulate prokaryotic pangenomes from a set of either genomic DNA sequences or provided genome annotatio...
122 days ago
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