JASMINE: Jointly Accurate Sv Merging with Intersample Network Edges
...merge structural variants (SVs) across samples. Each sample has a number of SV calls, consisting of position information (chromosome, start, end, length), type and strand information...714 days ago
auN: a new metric to measure assembly contiguity
...n a de novo assembly, we often measure the “average” contig length by N50. N50 is neither the real average nor median. It is the length of the contig such that this...684 days ago
449 days ago
ULTRA (ULTRA Locates Tandemly Repetitive Areas) : Effective Labeling of Repetitive Genomic Sequence
...ndem repeats inside genomic sequence. It is able to find repeats of any length and of any period (up to a ma...ts in highly repetitive sequence, regardless of the size of sequence or length of repeats. ULTRA offers mean...7 days ago