chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
...ata associated with chromosome elements (like gene expression) in the form of heat colors which can be highly advantageous in the scientific interpretations and research work. The package provide mul...1878 days ago
SOAP2 : Short Oligonucleotide Analysis Package 2
SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis Package). It i...s and the indexing data structures (2way-BWT) are developed by the algorithms research group of the Department of Co...2202 days ago
Instructions for Creating Your Own R Package
The following is a step-by-step guide to creating your own R package. Even beyond...course, youmay find this useful for storing functions you create for your own research or for editing existingR pack...1565 days ago
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VariantBam: Filtering and profiling of next-generational sequencing data using region-specific rules
VariantBam is a tool to extract/count specific sets of sequencing reads from next-generational sequencing files. To sa...ho intersect some region around the variant locations. Alternatively, if your scientif...2067 days ago
BioGPS: Spotlight on the Gene Expression Atlas
BioGPS opened 2016 with a publication in Nucleic Acids Research, right after the New Year holiday. Throughout the year, new designs for the site were being created, reviewed, adjusted, reviewed, a...2054 days ago
SKESA: strategic k-mer extension for scrupulous assemblies
SKESA is a DeBruijn graph-based de-novo assembler designed for assembling reads of micro...or SKESA is freely available at https://github.com/ncbi/SKESA/releases. Research Paper @ Link SKESA algo...2027 days ago
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EXCAVATOR: detecting copy number variants from whole-exome sequencing data
EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing...for the investigation of CNVs in largescale projects, as well as in clinical research and diagnostics. EXCAVATOR is...1976 days ago