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This is a tutorial for using the Pangolin Web Application. For information on using the command line tool, please visit the command line tool usage page. https://cov-lineages.org/resources/pangolin/tutorial.html929 days ago
- Telomere-to-telomere consortium We have sequenced the CHM13hTERT human cell line with a number of technologies. Human genomic DNA was extracted from the cultured cell...
721 days ago
- This part of the documentation describes the snakemake executable. Snakemake is primarily a command-line tool, so the snakemake executable is the pr...
640 days ago
- gget is a free, open-source command-line tool and Python package that enables efficient querying of genomic databases. gget consists of a collection of separate but interoperable modules, each designed to facilitate one type of database querying in a single line of code.
452 days ago
- This is the demo application of the Carrot2 clustering engine. It uses Carrot2's algorithms to organize search results into thematic folders. User in...
446 days ago
Creating Genetic Maps from GBS data
Genetic map, as the name suggest is simply knowing the relative positions of specific sequences across the genome. There are various methods to generate them, but most...292 days ago
Alvis: a tool for contig and read ALignment VISualisation and chimera detection
Alvis, a simple command line tool that can generate visualisations for a number of common alignment analysis tasks. Alvis is a fast and portable tool that accepts input...49 days ago
