Results for "C"
Users
About me: BioinformaticsOnline(BOL) founder. http://bioinformaticsonline.com/about Within the broad domain of bioinformatics and computational biology, I...tes evolution. I (We) develop certain computational pipeline,...earchGate @ https://www.researchgate.net/profile/Jitendra_Nar...Brief description: BioinformaticsOnline(BOL) adminInterests: BioinformaticsInterests: Computational BiologyInterests: Chromosomal BreakpointsInterests: Avian GenomicsInterests: SelectionInterests: Mammalian GenomicsInterests: Molecular EvolutionSkills: BioinformaticsSkills: BioconductorContact email: info@bioinformaticsonline.comWebsite: http://bioinformaticsonline.com/50 days ago
- About me: I am a computational biologist and currently working on system biology.Brief description: Insilico Biology LoverSkills: BioinformaticsSkills: Computational Biology
3957 days ago
- +281 more Users
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a grea...results and explain it biologically. 2. Not a merely coder!!...every question I posted on Stack Overflow or the BioStars for...3990 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need....36.tar.gz to /home/download# cd /home/download# gzip -d XML-...ti/usr/lib/perl5/5.10.0/usr/local/lib/perl5/site_perl/5.10.0/...bsp; : perl-CPAN &nb...3989 days ago
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Bookmarks
- Nice step wide information on perl module installation.
3989 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3989 days ago
- +1283 more Bookmarks
Files
- In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.
3992 days ago
Regular Expression Cheat Sheet
...egular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic s...data. We did not find any good and user friendly regular expression cheat sheet, hence write our ow...3992 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had...ink is best? or there might not be one specific language but a few that l...3991 days ago
Selecting between Python 2 and Python 3?
Which version is best for bioinformatician to work on?3991 days ago
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Pages
Bio++ : C Language libraries for your biological need
...s for easy implementation, it comes with a genuinely useful standard library that can itself be implemented in C,...etting and framework (that of C). When C++ was created, one o...io++. J Now the time has been change, the biological programm...d) substitution mapping.Sequences simulation under any substi...3987 days ago
- Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced functional programming with...atz" Matsumoto. It was influenced primarily by Perl, Smalltal...Perl, Lisp, Dylan, Pike, and CLU. The standard 1.8.7 implem...nspider.com/Languages/Ruby/QuickRef.html Ruby Annotationhttp...
3987 days ago
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Top-level pages
- "Bioinformatics is a science of biological predictions and analysis" -...cular) Bio - informatics = is conceptualizing biology in term...part of bioinformatics, and techniques and algorithms were sp...lth of additional information can be obtained. The complete g...
3987 days ago
- The completion of the first human g...start of the modern DNA sequencing era which resulted in further inventio...of high-throughput DNA sequencing, so called the “high...mic level, speed up the genomic sequencing projects. In the f...sort of biological needs, which compel us to learn new biolo...
3987 days ago
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Wire posts
News
- The ongoing genomic research in USA contributed $31 billion to the U.S. gross national product and helped support 152,000 jobs. Reference: http://www.unitedformedicalresearch.com/wp-content/uploads/2013/06/The-Impact-of-Genomics-on-the-US-Economy.pdf
3992 days ago
- The R project actively supports two conference series, organized regularly by members from the R community: useR! - providing a...rum to the R user community - and DSC - a platform for developers o...Albacete, Spain. http://www.edii.uclm.es/~useR-2013// ...
3991 days ago
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Opportunity posts
- At TU Dresden, Faculty of Computer Science, the DFG Research Training Group GRK 1907 “Role-based Software Infrastructures for continuous-context-s...approach are arranged with specialized courses that prepare t...documents summarizing their academic performance, and a stat...
3987 days ago
- CSIR-INSTITUTE OF HIMALAYAN BIORESOURCE TECHNOLOGY (Council of Scientific and Industrial Research) PALAMPUR (H.P.)-176 061...gorithm development and sequence analysis on Next Generation...Age Relaxation: 5 years for SC/ST,3 years for OBC and widows...
3984 days ago
- +609 more Opportunity posts
ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...anization and evolution of biological systems using computational biology and bioin...formatics techniques. We seek to accurately predict links, such a...systems using comprehensive genomics data like genome sequence an...tion and analysis software. Predicting biologically relevant pro...3987 days ago
- The IBL laboratory focuses on the multi-disciplinary analyses of the global responses of model microorganisms, cyanobacteria (ma...PCC6803) and yeasts (mainly Saccharomyces cerevisae) to envir...e-saclay-ibitec-s/unites-de-recherche/service-de-biologie-int...
3959 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, na...Genefinder. Har Ligand jo dock karega. Alignment to hona h...re Paas Hai Aao Database Search Kare Bioinformatician No.1...quence Parayi *Warning: It contain hindi words.3958 days ago
Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunately been overshadow...resented at the Usenix Winter 1992 Technical Conference, entitled "Camels and Needle...ollowing poem published in both the Economist and the Guardian: #!/...close them, yet. accept (yourself, changes),bind (grief, despair);...3958 days ago
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Video
Personalised Medicine - Animation
Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.3943 days ago
Influenza animation - flu virus mechanism
Animation of the mechanism of an influenza virus and how Crucell's antibodies target the HA1 proteins o...s and prevent further spread of influenza. Client: Crucell Direction, Desi...rm Music & Sound Design: Javier Barrero, Logical Disorder Production Company...3892 days ago
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Bio-Scripts
Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #Windows install...ad ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.7.1/ncbi-blas...ih.gov/blast/executables/blast+/2.7.1/ncbi-blast-2.7.1+-win64.exe #...1186 days ago
- #!/usr/bin/perl use strict; use warnings; #assign strings to variables my $DNA = "GATTACACAT"; my $polyA = "AAAA"; #concatenate two strings my $mo...ifiedDNA has length $DNAlength\n"; #extract the second codon in $modifie...
2956 days ago
- +413 more Bio-Scripts
Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics tools or softw...ly, map reads, align reads, and expression analysis. Recommendations welcomed. Which l...3570 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3566 days ago
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Tryst
Interview with a bioinformatician series ...
The aim of this series to interviews some notable bioinformaticians to get their views on various aspects of bioinformatics research. H...lly these answers will prove useful to others in the field, especially to those who are just st...3456 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...r Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBITAK M...aims for the development of a computational method to design...lready a massive need for effective methods to eliminate the...2401 days ago
Groups
Bioinformatics as a business, not to be confused with bioinformatics as a field of study, is at an interesting crossroads. As an academic branch of learning, bio...nary endeavor between computer science and molecular biology. B...business ideas. Your ideas and comments are welcome....3992 days ago
INTIMATE secrets hidden in your DNA could be stolen without you even realising. By taking a glass from which you have drunk, a "genome hacker" could obtain a comprehensive scan of your geno...to Alzheimer's disease. However, as a computational biologist or bioi...3992 days ago
- +22 more Groups
Tags
- Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three separate repositories: SamtoolsReading/writing/editing/indexing/viewing SAM/BAM/CRAM formatBCFtoolsReading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel ...
Tags: Bioinformatics, HTSlib, NGS, Samtools, C, Lib
2647 days ago
- The AnnotationSketch module is a versatile and efficient C-based drawing library for GFF3-compatible genomic annotations. It is included in the GenomeTools distribution. Additionally, bindings to the Lua, Python and Rubyprogramming languages are provided. ...
Tags: AnnotationSketch, Annotation, Sketch, C
2545 days ago
Comments
Comment on "LoReTTA, a user-friendly tool for assembling viral genomes from PacBio sequence data"
Detail paper here https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8111061/5 days ago
Comment on "Benchmarking Perl Module !"
Benchmarking a Perl module involves measuring the performance of the module in terms of its execution time and memory usage. T...ction(); } Run the benchmark: Call the timethese func...chmark using the timethese function from the Benchmark module...455 days ago
- +1005 more Comments
