Comment on "Benchmarking Perl Module !"
...e done using the Perl Benchmark module, which provides a simple and standardized...ce of your Perl module to other modules or to previous versions of your own modul...rformance of the module. The Benchmark module provides a simple and standardized...560 days ago
Comment on "Short-read assembly using Spades !"
...assembly: If the quality of the initial assembly is not satisfactory, SPAdes allows for an iterative assembly approach where the output from the previous assembly is used as input...560 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
...you the perl that's located within your conda environment. In this case, it shou...your conda-directory. When you install packages via cpan it will also print the...ra-sure, you can also install most Perl packages via conda. Replace the ':' by '-...561 days ago
Comment on "Short-read assembly using Spades !"
...nopore sequencing platforms. Here is a brief overview of how to use SPAdes for sh.... If the reads are paired-end, they should be provided in separate files for each...be saved in a file named contigs.fasta. You can view the contigs using a text ed...566 days ago
Comment on "Tools for Sequence translation !"
...ng nucleotide sequence). BioPython: This is a Python library that provides several tools for bioinfor...including sequence translation. It supports several genetic codes and provides functions for translating...566 days ago
Comment on "Tools for Differential expression analysis"
...mial distribution to model the count data and provides methods for estimating var...ized linear model to model the count data and provides methods for estimating dis...e relative expression values of the genes and provides a user-friendly interface...566 days ago
Comment on "Tools for RNA classification"
...and their corresponding covariance models. It is based on Infernal and provides a comprehensive resource f...alysis approaches to predict tRNA genes. These tools can be used individually or in combination to ac...566 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...comparing the location and order of the orthologous genes. Synteny can be visualized using tools such as C...tent, and evolutionary relationships between species. The analysis can provide insights into the genomic e...568 days ago
Comment on "Basic command-line to run BLAST"
...ing the NCBI BLAST website or locally using the command-line interface. Interpret the results: After the search is complete, the results can be viewed and downloaded. The resul...568 days ago
Comment on "Elgg Installation steps !"
Useful for debugging https://stackoverflow.com/questions/43094726/your-password-does-not-satisfy-the-current-policy-requirements https://elgg.org/discussion/view/1945994/elgg-requires-the-php-extension-gd751 days ago