Awesome perl frameworks, libraries and software - PART 1
...aaker/convos - Better group chat mikaku/Monitorix -...bsp;- Reliable PostgreSQL Backup & Restore gempesaw/Selen.... ido50/Svsh - Process supervision shell for daemontools...rotocol in Perl demanuel/NewsUP - NewsUP a binary usenet...2531 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...ers of an organism. basal group -- The earliest diverging group within a clade; for instance,...ith homology. crown group -- All the taxa descended fro...ous scientific methods. ingroup -- In a cladistic analysis, t...of a single lineage. stem group -- All the taxa in a clade pr...2504 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...Mer Reference-independent mitochondrial haplogroup classifier from NGS data (k-m...genome sequencing projects; provides bootstrap support to assess uncertainty in...nomer.iobio.io/ Other d2-tools Word-based (k-tuple) comparison (pairwise dissi...2413 days ago
2393 days ago
Single Cell RNAseq data analysis tutorial !!
...g differentiation http://biorxiv.org/content/early/2016/11/21/088856 SCOUP is a probabilistic model to a...expression data during differentiation https://github.com/hmatsu1226/SCOUP scLVM is a modelling framewo...2392 days ago
2392 days ago
Converting BLAST output into CSV
Suppose we wanted to do something with all this BLAST output. Generally, that’s the case - you want to retrieve all matches, or do a reciprocal BLAST, or someth...2379 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED...cle) developed in 2005 has been replaced with an upgraded version that is capable...as mainly created to analyze parasite genomes of up to about 300 Mb. MAKER: A po...2373 days ago
Bioinformatics Web Application Development with Perl
...ngs in better ways. In particular, Mojolicious goes to great lengths to support new web standards, such a...else. Any good modern Perl web framework (including those listed here) supports PSGI. Several deployment...2363 days ago
PerlOneLiner for Bioinformatician
...rl -le 'print ("a".."zz")'perl -le 'print "aa".."zz"' # Create a hex lookup table@hex = (0..9, "a".."f") # Convert a decimal number to hex using @hex lookup tableperl -le '$num = 255; @h...2344 days ago