Results for "JAVA languages"
Users
Skills: JAVA languages3430 days ago
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependenc...io-samtools-perl - Perl interface to SamTools library for DNA sequencinglibbiojava-java - Ja...3977 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge...ache As a bioinformatician you are supposed to know the basics of programming languages, and if you are not good at i...3734 days ago
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Bookmarks
Taverna Workflow Management System
Taverna is an open source domain independent Workflow Management System – a suite of tools used to design a...hrough a range of organisations and projects. The Taverna suite is written in Java and...3942 days ago
Java and BioJava Tutorial links
BioJava provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of this bookmark is to provide useful links for bioinformatician. Please add more useful Java and BioJava links here ...3930 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages....3979 days ago
- I found several angry bioinformatician writting a lot o...y also did comparative analysis with several other languages. What do you think about this...www.ruby-lang.org/en/documentation/ruby-from-other-languages/ Ruby Introduction : http://...
3945 days ago
Pages
- Ruby was created by Yukihiro Matsumoto, who wished to create a new language that ba...y supersede the slower Ruby MRI. Ruby Quick Referencehttp://www.zenspider.com/Languages/Ruby/QuickRef.html Ruby Anno...
3974 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein seq...) in our source code. This might be equivalent to twice or more lines of other languages because of Ruby's extremely h...3974 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA...nformation. This tutorial is aimed to introduce you new biological programming languages with their packages/libraries...
3974 days ago
- "Bioinformatics is a science of biological predictions and analysis" -- Jitend...ses have to be accessed simultaneously and correlated with each other. Special languages have been developed to facili...
3974 days ago
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Wire posts
News
- In current era, we are handling huge amount of genomics data, and analysing it to m...ts. BlaSTorage shows comparable speed of more basic parser written in compiled languages as C++ and can be easily inte...
3916 days ago
BEReX : Biomedical Entity-Relation eXplorer
BEReX is a new biomedical knowledge integration, search, and exploration tool. BEReX integrates eight popular dat...rk by removing or adding selected nodes. BEReX is implemented as a stand-alone Java appl...3867 days ago
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Opportunity posts
Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathematical Sciences at Chalmers University of Technology an...ly valued. The applicant should also be proficient in programming (e.g. Python/Java/C) a...3975 days ago
Senior Bioinformatics Programmer and SRF at BIOTECH PARK Lucknow
BIOTECH PARK Advt. No. 3 (8)/BP/13 A walk-in-interview will be held in the Biotech Park Office at Sector...etc. c) Desirable Knowledge of Bioinformatics tools, Windows, Linux, C++, JAVA / JAVA Scri...3935 days ago
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Fun
Golden Rules of Bioinformatics
All constant are variable. Copy and paste is a genetic error. First solve the p...rong conclusion with confidence. Bug is a undocumented feature in programming languages. Good biological programmer...3943 days ago
- Why was the Bioinformatics fired from his job? A: He was getting too Sassy. What did the bioinformatici...y was the bioinformatician always so sleepy? A: He/She wasn’t given any Java. &n...
3207 days ago
Video
Drew Berry: Animations of unseeable biology
http://www.ted.com We have no ways to directly observe molecules and what they do -...lopment and the arts. Closed captions and translated subtitles in a variety of languages are now available on TED.com,...3736 days ago
Stephen Friend: The hunt for "unexpected genetic heroes"
What can we learn from people with the genetics to get sick — who don't? With most...the arts and much more. Find closed captions and translated subtitles in many languages at http://www.ted.com/transla...3654 days ago
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Bio-Scripts
- ➜ trinityrnaseq-Trinity-v2.6.6 git:(master) ✗ ./Trinity --seqType fq --max_memory 250...seq/releases Monday, July 9, 2018: 10:35:42 CMD: java -Xmx64m -XX:ParallelGCThreads...itTester.jar 0 Monday, July 9, 2018: 10:35:42 CMD: java -Xmx...
2154 days ago
Install Parrot Virtual Machine !
#Parrot is a virtual machine designed to efficiently compile and execute bytecode for dynamic languages jit@jit-HP-Pro-3335-MT:~/D...1564 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a pr...p reads, align reads, and expression analysis. Recommendations welcomed. Which languages would you recommend to a stud...3557 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3553 days ago
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Groups
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It p...equences and 3D structures. The goal of the biojava project is to facilitate rapi...cuss the features, uses, and application of BioJava in b...3930 days ago
Perl(Practical Extraction and Reporting Language) is a family of high-level, general-purpose, interpreted, dynamic programming languages. Perl was originally develope...3979 days ago
