List of motif discovery tools !
...nce alignments use different methodologies. W-ChIPMotifs -- ChIP-based protein Motif discovery web server Find de novo protein motifs from chromatin immunoprecipitation data....2033 days ago
Encode sequencing data freely available to download and use for academic means
In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA...3746 days ago
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Useful Publications and Websites for Deep Sequencing Data Analysis
...tral Assemblathon 1: A competitive assessment of de novo short read assembly methods. Earl et al, Genome Research 21:2224-2241, 2011 Full Text Chromatin immunoprecipation analysis: C...3819 days ago
Commercial and public next-gen-seq (NGS) software
...erl/R. FindPeaks - perform analysis of ChIP-Seq experiments. It uses a naive algorithm for identifying regions of high coverage, which represent Chromatin Immunoprecipitation enrichmen...3559 days ago
Chromatin: From nucleosomes to chromosomes, 30 April - 2 May 2014
...ced the Wellcome Trust Scientific Conference Chromatin: From nucleosomes to chromoso...f meetings focused on fundamental aspects of chromatin biology. The conference will...on the latest developments in understanding chromatin structure and function, parti...3965 days ago
1406 days ago
PhD at INSTITUTE OF LIFE SCIENCES, Bhubaneswar
...cipal investigator 1. Computational Cancer Biology Dr. Anshuman Dixit 2. Immunogenomics & Systems Biology Dr. Sunil Kumar Raghav 3. Chromatin remodeling and hematopoiesis...2937 days ago
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DNA is packaged in a chromosome experiment
...cores.[1] This structure is often compared to thread wrapped around a spool.[2] Nucleosomes form the fundamental repeating units of eukaryotic chromatin,[3] which is used to pack the...3917 days ago
How DNA is Packaged (Advanced)
...leosome. Six nucleosomes are coiled together and these then stack on top of each other. The end result is a fiber of packed nucleosomes known as chromatin. This structure, is then loop...3917 days ago
Tags: Bioinformatics, Computational Biology, Genomics, RNAseq, NGS, Chromatin, RNA, Cancer, CRG, Roderic Guigó
3574 days ago
MIT Computational Biology Group
My research group consists primarily of computer science graduate students and postdocs with expertise in algorithms, statistical inferences and machine learning, and sharing a passion for understanding fundamental biological problems. We work in a highly interdisciplinary environment at the i...Tags: Bioinformatics, Computational Biology, Genomics, RNAseq, NGS, Chromatin, RNA, Manolis Kellis, Chromosome, ENCODE
3466 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...Systems Biology BioinformationGenome AnnouncementsBMC GeneticsBMC Medical GeneticsBMC Medical GenomicsClinical EpigeneticsEpigenetics & Chromatin2367 days ago