Tadpole is 250x faster than SPADes assembler !
...ng parameters: prefilter=0 If set to a positive integer, use a countmin...tendleft=100 (el) Extend to the left by at most this many bases. extendrigh...thm. errorpath=1 (ep) For debugging purposes. Junk-removal parameters...1005 days ago
Perl script for Smith-Waterman Algorithm
# Smith-Waterman Algorithm # usage statement die "usage: $0 \n" unless @ARGV == 2; # get sequences from command line my ($seq1, $seq2) = @ARGV; # scoring...979 days ago
979 days ago
Inreractive SCP / File transfer !
...user to enter Destination Server while [ x$desthost = "x" ]; do #next line prin...stores entered value to variable with name desthost read -p "Destination Server...on destination server scp -r "$filename" "$desthost":"$destpath" #end of if fi...979 days ago
978 days ago
Get the Linux system information !
...LOG_ESC) clear echo "Program aborted." >&2 exit 1 ;; esac case $selection in 1 ) result=$(echo "Hostname: $HOSTNAME"; uptime) display...977 days ago
Installing Covid19 Environment !
...################################################## | 100% fonts-conda-ecosyste | 4 KB | ###########...for searching BUSCO genes) -- works in Linux only! To be able to use those, please run quast-downl...952 days ago
948 days ago
Bash script to simulate a genome !
...ithub.com/chhylp123/hifiasm/issues/33 # Use Drosophila melongaster PacBio asse...onvert to diploid with approximately 2% heterozygosity rate, max indels=20bp # m...grep -v ">"|wc -m # 140687135 # 2% heterozygosity is how many bases calc 0....946 days ago
Installing manadatory software for websites hosting !
#See all the installed apt list --installed apt list #Installing Apache #To install Apache, install the latest meta-package apache2 by running: sudo apt upda...945 days ago