Results for "in-depth"

Blogs

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  • HiCdat

    HiCdat: a fast and easy-to-use Hi-C data analysis tool HiCdat is easy-to-use and provides solutions starting from aligned reads up to in-depth analyses. Importantly, HiCdat is focusse...

    3044 days ago

  • CovCal: Coverage / Read Count Calculator

    Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configurat...

    2205 days ago

  • +19 more Bookmarks

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  • Genome and coverage https://rtsf.natsci.msu.edu/_rtsf/assets/File/depth%20and%20coverage.pdf #Coverage #Genome #Depth #Reads #NGS

    2761 days ago

  • print_fs("~/flowchart/", depth = 4) #Print #FileStructure

    2006 days ago

Opportunity posts

ResearchLabs posts

  • The Mills lab

    The laboratory is focused on the discovery and analysis of structural variation (SVs) from genomic sequence data. As part of the 1000 Genomes Project and other endeavors...

    3032 days ago

Video

Bio-Scripts

  • Coverage / Depth of reads !

    # get total number of bases covered at MIN_COVERAGE_DEPTH or higher samtools mpileup mapping_result_sorted.bam | awk -v X="${MIN_COVERAGE_DEPTH}" '$4>=X' | wc -l 32876...

    2249 days ago

  • Downloading GATK !

    jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/releases/download/4.0.2.1/gatk-4.0.2.1.zip --2018-08-30 11:47:20-- https://github.com...

    2114 days ago

  • +6 more Bio-Scripts

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