Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
...Homebrew if you haven't already installed it by entering the following command:...in/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/...brew install perl Install cpanminus by entering the following command:...466 days ago
Comment on "Perl Module Installation"
...Homebrew if you haven't already installed it by entering the following command:...in/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/...brew install perl Install cpanminus by entering the following command:...466 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Genome synteny analysis is the comparison...low for conducting a genome synteny analysis: Choose the spec...y relationship or biological interest. Obtain the genome sequ...dentify orthologous genes: Identify the orthologous genes betw...Validate the results of the synteny analysis by comparing them...467 days ago
Comment on "Basic command-line to run BLAST"
...BLAST (Basic Local Alignment Search Tool) is a widely used...T program: BLAST has several different programs that are tailored to...ld be in a FASTA format and can be entered directly into the BLAST w...or locally using the command-line interface. Interpret the res...467 days ago
Comment on "CovCal: Coverage / Read Count Calculator"
...is defined as the average number of reads that covers each base of the reference genome. Estimating the sequencing coverage is very important when you are simulating datas...627 days ago
Comment on "Elgg Installation steps !"
Useful for debugging https://stackoverflow.com/questions/43094726/your-password-does-not-satisfy-the-current-policy-requirements https://elgg.org/discussion/view/1945994/elgg-requires-the-php-extension-gd650 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
If you are on Ubuntu https://packages.ubuntu.com/bionic/bioperl sudo apt-get install <name_mentioned_in_list>689 days ago
Comment on "Run miniasm assembler on nanopore reads !"
minimap2 –x ava-ont \ ../../trimming_practical/nanofilt/nanofilt_trimmed.fastq \ ../../tr...d.fastq \ ./minimap.paf.gz > miniasm.gfa awk ’/^S/{print “>”$2”\n...840 days ago
Comment on "Run multiple bash command in screen !"
srun --partition=compute --nodes=1 --ntasks-per-node=40 --pty bash881 days ago
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
...sets' % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed100 13.8M 100 13.8M...rmat' % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left...924 days ago