Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
...l % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed100 11.4M 100 11.4M 0 0 509k 0 0:00:23 0:00:23 --:--:-- 558k(base) [jnarayan@hn1 TOOLS]$...893 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...nbsp;(1.452 :: 1.465) Algorithms for Molecular Biology (1.463 :: 2.155) IEEE-ACM Transactions on Co... (1.436 :: 1.605) Bulletin of Mathematical Biology (1.389 :: 1.553) Computers in Biology and B...1118 days ago
Comment on "Installing Bio::SCF perl module"
jit@jit-HP-Pro-3335-MT:~/Downloads$ sudo cpan -T install Bio::SCP[sudo] password for jit: Loading internal null logger. Install Log::Log4perl for logging messagesReading '/home/jit/.cpan/Metadata' Database was generated on Fri, 13 Mar 2020 03:55:17 GMTinstall is up to date (0.01).1455 days ago
Comment on "Setting up autoConTAMPR !"
...libc-bin (2.19-0ubuntu6.14) ...Removing intermediate container 7adc9dbdb955 ---> 1ca0a9d66656Step.............. okt/50_utf8.t .............. okt/51_utf8.t .............. okt/55_combi.t ............. okt/60_...1455 days ago
Comment on "NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore"
...53A%2F20200203%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20200203T053558Z&X-Amz-Expires=300&X...53A%2F20200203%2Fus-east-1%2Fs3%2Faws4_request&X-Amz-Date=20200203T053558Z&X-Amz-Expires=300&X...1567 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...nbsp;(1.452 :: 1.465) Algorithms for Molecular Biology (1.463 :: 2.155) IEEE-ACM Transactions on Co... (1.436 :: 1.605) Bulletin of Mathematical Biology (1.389 :: 1.553) Computers in Biology and B...1856 days ago
Comment on "Installing Porechop on Ubuntu !"
...rward) 75.0 76.9 Barcode 51 (forward) 76.0 76.0 Barcode 52 (forward) 76.9 79.2 Barcode 53 (forward) 76.0 76.9 Barcode 54 (forward) 76.9 80.0 Barcode 55 (forward) 79.2 77.8 Barcode 5...2119 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...CMD INSTALL poRe_0.16.tar.gz The fastq extraction scripts for poRe are in github, so let’s go get those: git clone https://github.com/mw55309/poRe_scripts.git We wil...2187 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...ker_pipeline::748.729*17.18] mapped 55098 sequences[M::worker_pipeli...ker_pipeline::899.174*17.66] mapped 55252 sequences[M::worker_pipeli...er_pipeline::2271.864*18.14] mapped 55098 sequences[M::worker_pipeli...er_pipeline::3569.479*18.57] mapped 55836 sequences[M::worker_pipeli...2294 days ago
Comment on "Does anyone have Nanopore latest updates?"
Improved data analysis for the MinION nanopore sequencer http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3290.html A complete bacterial genome assembled de novo using only nanopore sequencing data http://biorxiv.org/content/early/2015/02/20/0155523371 days ago