Results for "A"
Users
About me: BioinformaticsOnline(BOL) founder. http://bioinformaticsonline.com/about Within the broad domain...pipeline, and algorithms to harness the huge amount of biolo...istracted by the flood of NGS and epigenomic data, but curren...https://ethos.bl.uk/OrderDetails.do;jsessionid=E6D7E9292B11...Brief description: BioinformaticsOnline(BOL) adminLocation: New Delhi, INDIAInterests: BioinformaticsInterests: Computational BiologyInterests: Chromosomal BreakpointsInterests: Avian GenomicsInterests: Evolutionary BiologyInterests: AdaptationInterests: Mammalian GenomicsInterests: Molecular EvolutionInterests: GWASSkills: BioinformaticsSkills: JavaSkills: BioJavaContact email: info@bioinformaticsonline.comWebsite: http://bioinformaticsonline.com/25 days ago
- About me: I am a computational biologist and currently working on system biology.Location: Punjab, INDIAInterests: Pathway AnalysisSkills: BioinformaticsSkills: Computational Biology
3932 days ago
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Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic b...ind to sources of knowledge that others may shut out. In oth...omputers, writing codes. They always think their job is to pr..., it is a fact. You must be passionate about more than progr...3965 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependencies. Installing Pe...ians :). # yum install perl-CPANOutput of yum install perl-CP...tion to save the settings.# cpanSorry, we have to rerun the c...3965 days ago
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Bookmarks
- Nice step wide information on perl module installation.
3965 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3965 days ago
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Files
- In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.
3967 days ago
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic stri...t find any good and user friendly regular expression cheat sheet, henc..., including symbols, ranges, grouping, assertions and some sample patt...3967 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS,...several Bioconductor packages. Matlab had a lot of powerful tools and...t? or there might not be one specific language but a few that lend the...3967 days ago
Selecting between Python 2 and Python 3?
Which version is best for bioinformatician to work on?3967 days ago
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Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for easy...rting features meant to encourage and support the development...ves, parameter transforms...),A new library, Bio++ RAA (Remot...ucleotides,JC, DSO78, JTT92 + any PAML-formated model descrip...3962 days ago
- Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balance...ng language that combines syntax inspired by Perl with Smallt...reference. As of 2010, there are a number of complete or upc....wikibooks.org/wiki/Ruby_Programming Ruby CookBookhttp://en....
3962 days ago
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Top-level pages
- "Bioinformatics is a science of biological predictions and analysis" -- Jitendra Narayan "The mathematical, s...alysis and interpretation of various types of data including...between the DNA sequence and a computer program (it can be s...e gene – one protein – one structure – one...
3962 days ago
- ...he completion of the first human genome drafts was just a start of the modern DNA sequencing era which resulted...tion, improved development toward new advanced strategies of...easing genome sequencing cost and desire to explore and under...velope sotware/tools bioinformatician/ biological programmers...
3963 days ago
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Wire posts
News
- The ongoing genomic research in USA contributed $31 billion to the U.S. gross national product and helped support 152,000 jobs. Reference: http://www.unitedformedicalresearch.com/wp-content/uploads/2013/06/The-Impact-of-Genomics-on-the-US-Economy.pdf
3967 days ago
- The R project actively supports two conference series, organized regularly by members from the R community: useR! - providing a forum to the R user community...- and DSC - a platform for developers of statistical software. Recently u...
3967 days ago
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Opportunity posts
- At TU Dresden, Faculty of Computer Science, the DFG Research Training Group GRK 1907 “Role-based Software Infrastructures f...l, Schroeder, and Strahringer at TU Dresden. Alongside their...h. Applications from women are particularly welcome. The s...
3963 days ago
- CSIR-INSTITUTE OF HIMALAYAN BIORESOURCE TECHNOLOGY (Council of Scientific and Industrial Research) PALAMPUR (H.P.)-176 061 Advertisement NO.14/2013 App...sent: ngs@ihbt.res.in 2. Name of Position: Research Assoc...ment: www.ihbt.res.in/recruit/Advt14_2013.pdf
3959 days ago
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ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
We study the organization and evolution of biological systems using computational biology and bioinformatics techniques....inks, such as specific molecular interactions, in eukaryotic...ological pathway and network databases and analysis tools...3963 days ago
- The IBL laboratory focuses on the multi-disciplinary analyses of the global responses of model microorganisms, cyanobacteria (mainly S...6803) and yeasts (mainly Saccharomyces cerevisae) to environm...che/service-de-biologie-integrative-et-genetique-moleculaire-...
3934 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munna Bhai Promoter Gene se Genome...Raju ban gaya Genefinder. Har Ligand jo dock karega. Alig...ya Hai GeneScan Karke Dekho Alignment Apna Sequence Parayi...3933 days ago
Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunately been overshadowed by that of the reigning Perl Poet, S...hnical Conference, entitled "Camels and Needles: Computer Poe...blished in both the Economist and the Guardian: #!/usr/bin/p...lf, changes),bind (grief, despair); require truth, goodness...3933 days ago
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Video
Personalised Medicine - Animation
Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.3919 days ago
Influenza animation - flu virus mechanism
Animation of the mechanism of an influenza virus and how Crucell's antibodies target the HA1 proteins on the virus and prevent further spread of influenza. Client: Cruc...Music & Sound Design: Javier Barrero, Logical Disorder Production Company:...3867 days ago
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Bio-Scripts
Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #Windows installation First: Download ftp:...-win64.exe with your web browser. #If that FTP links does not work, try...1162 days ago
- #!/usr/bin/perl use strict; use warnings; #assign strings to variables my $DNA = "GATTACACAT"; my $polyA = "AAAA";...wo strings my $modifiedDNA = $DNA.$polyA; #calculate the length of...A); print "Modified DNA: $modifiedDNA has length $DNAlength\n"; #ex...
2932 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics...ically want to do de-novo assembly, map reads, align reads, and expression ana...3545 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3541 days ago
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Tryst
Interview with a bioinformatician series ...
The aim of this series to interviews some notable bioinformaticians to get their views on various aspects of bioinformatics research. Hopefully these answers will prove us...rs in the field, especially to those who are just starting their bioinformatics car...3432 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at...ected body fluids will be revealed within the scope of the pr...ars? For my current research, I would like to design a...2377 days ago
Groups
Bioinformatics as a business, not to be confused with bioinformatics as a field of study, is at an interesting crossroads. As an acad...rning, bioinformatics remains mostly what it always was — a cross-disc...ifferent criteria for success, and it has received a lot of bad press...3968 days ago
INTIMATE secrets hidden in your DNA could be stolen without you even realising. By taking a glass from which you have drunk, a "genome hacker" could o...p determine your susceptibility to a wide range of diseases, from...codes. Here we will discuss the broad area of genome hacking ...3968 days ago
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Tags
Comments
Comment on "Basic command-line to run BLAST"
Understanding the parameters https://www.arabidopsis.org/Blast/BLASToptions.jsp413 days ago
Comment on "Benchmarking Perl Module !"
Benchmarking a Perl module involves measuring the performance of the module in terms of...rmance of Perl code. Here is a quick guide to benchmarking a...Write a simple benchmark program that exercises the functiona...and a reference to the benchmark subroutine. Here's an examp...430 days ago
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