2120 days ago
Computational Proteomics : Lets remember the basics
I spend some of my valuable time in computational drug designing sector. I remember my initial proteomics days, playing with interactive protein visualization software and dreaming big. Fortunately...3487 days ago
Computer simulation of genetic mechanism !!
Computer simulation is the discipline of designing a model of an actual or theoretical physical/biologic...BEERS BEERS was designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct diff...2974 days ago
Bioinformatics Algorithm Demonstrations and Tutorials
Abstract This project presents demonstrations of selected computer science algorithms important in bioinformat...platform for demonstration of algorithms, since various steps of the...ogramming experience. The algorithms demonstrated include two app...rg/downloads/bae/BioinformaticsAlgorithm...3704 days ago
RACA: Reference-Assisted Chromosome Assembly
Rreference-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequence scaffolds generated by NGS and assemblers into longer chromosomal fragments using...2950 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has...used for automatic prediction of trans-membrane (TM) protein structure. While algorithm...3944 days ago
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down -...tly abstract and fluent to describe algorithms and interactions in a wide v...ses like GenBank, EMBL or SwissProt,Algorithms for plotting trees, with sup...lihood (NNI, including a PhyML-like algorithm...3947 days ago
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence reads a...s 0.7.7 – A Cycle-Basis Algorithm for Accurate Haplotype Assemb....2.1 – Network Matching Algorithm to Gene AssemblyGeneStitch&nb...e AssemblyIsoLasso is an algorithm to assemble transcripts and e...2685 days ago
3947 days ago
3946 days ago
OSDDlinux : Computational resources for drug discovery
Open Source Drug Discovery (OSDD), a mission to provide affordable drugs for poors, is in the process of creating an in silico plateform for designing, discovering and simulating d...3877 days ago
C-DAC launch supercomputing facility "Param Bio Blaze" !!!
The bioinformatics centre at Centre for Development of Advanced Computing (C-DAC) compl...he difference between normal tissues and tissues from breast cancer patients- Designing anti-cancer molecules, a coll...3728 days ago
3948 days ago
3944 days ago
ChemPath_UP Computational Biology
This laboratory basically deals with Molecular Modeling and Drug Designing. The main stream research on estrogen therapy and diabetes. The laboratory is located in the Department of Chemical pathol...3732 days ago
Computational Structural Biology Lab IITKGP
The major areas of research: Molecular recognition: Protein-protein, Protein-Nucleic a...velopment of protein-protein, protein-RNA docking algorithm and prediction of binding sit...in proteins. Study of miRNAs and development of algorithm...3230 days ago
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munna...Structure Dus Numbari GCG Karo Sajana Naukar NCBI Ka 1942 -- A KEGG Story Algorithm...3918 days ago
Mathematics for Computing : Huffman Code (Tree Approach)
Determining a Huffman code for a discrete memoryless source, using the Huffman Tree algorithm3879 days ago
Needleman-Wunsch Algorithm in Perl
#!/usr/bin/perl # USAGE: perl nw.pl HEAGAWGHEE PAWHEAE BLOSUM50.txt -8 # See: "Biological sequence anaysis" Durbin et al. ed. CUP 1998, Pg. 19 # Needleman-W...2905 days ago
Genetic Algorithms demonstration with word DNA in Perl
#!/usr/bin/perl -w # GA demonstration with word DNA (512 bits) use strict; use Data::D...ally written by Abigail # Documentation for the algorithm is at # http://theoryx5.uwin...=> 0, fitness => 0 }; } } __DATA__ about algorithm...2371 days ago
Tags: Programming, Algorithm Designing, Sequence Analysis, Data Mining & Statistical Study
2120 days ago