BOL

Results for "C"

Users

• • Jitendra Narayan@admin

  

  Jitendra Narayan

  About me: BioinformaticsOnline(BOL) founder. http://bioinformaticsonline.com/about Within the broad domain of bioinformatics and computational biology, I...tes evolution. I (We) develop certain computational pipeline,...earchGate @ https://www.researchgate.net/profile/Jitendra_Nar...Brief description: BioinformaticsOnline(BOL) adminInterests: BioinformaticsInterests: Computational BiologyInterests: Chromosomal BreakpointsInterests: Avian GenomicsInterests: SelectionInterests: Mammalian GenomicsInterests: Molecular EvolutionSkills: BioinformaticsSkills: BioconductorContact email: info@bioinformaticsonline.comWebsite: http://bioinformaticsonline.com/

  10 days ago

• • Jai Singh@jasoos

  

  Jai Singh

  About me: I am a computational biologist and currently working on system biology.Brief description: Insilico Biology LoverSkills: BioinformaticsSkills: Computational Biology

  4150 days ago

• +283 more Users

Blogs

• • Jitendra Narayan@admin

  

  Five unique traits of effective computational biologist

  Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a grea...results and explain it biologically. 2. Not a merely coder!!...every question I posted on Stack Overflow or the BioStars for...

  4183 days ago

• • Jit@jit.aber

  

  How to install Perl modules manually, using CPAN command, and other quick ways

  As a bioinformatics programmer, and crunchy data analyser you need....36.tar.gz to /home/download# cd /home/download# gzip -d XML-...ti/usr/lib/perl5/5.10.0/usr/local/lib/perl5/site_perl/5.10.0/...bsp;    : perl-CPAN    &nb...

  4183 days ago

• +147 more Blogs

Bookmarks

• • Jitendra Narayan@admin

  

  Perl Module Installation

  Nice step wide information on perl module installation.

  4182 days ago

• • Jai Singh@jasoos

  

  Well designed regular expression cheat sheet

  In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.

  4182 days ago

• +1310 more Bookmarks

Files

• • Jitendra Narayan@admin

  

  Linux Cheat Sheet

  In an attempt to find a good Linux reference for bioinformatician and BOL readers, I was unsuccessful at finding a decent one on the Internet. So, we decided to make a cheat sheet for biological programmers.

  4185 days ago

• • Jitendra Narayan@admin

  

  Regular Expression Cheat Sheet

  ...egular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic s...data. We did not find any good and user friendly regular expression cheat sheet, hence write our ow...

  4185 days ago

• +57 more Files

Discussion topics

• • Jitendra Narayan@admin

  

  Which are the best statistical programming languages to study for a bioinformatician?

  In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had...ink is best? or there might not be one specific language but a few that l...

  4184 days ago

• • Rahul Agarwal@raag

  

  Selecting between Python 2 and Python 3?

  Which version is best for bioinformatician to work on?

  4184 days ago

• +10 more Discussion topics

Pages

• • Jitendra Narayan@admin

  

  Bio++ : C Language libraries for your biological need

  ...s for easy implementation, it comes with a genuinely useful standard library that can itself be implemented in C,...etting and framework (that of C). When C++ was created, one o...io++. J Now the time has been change, the biological programm...d) substitution mapping.Sequences simulation under any substi...

  4180 days ago

• • Jitendra Narayan@admin

  

  Ruby Language

  Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced functional programming with...atz" Matsumoto. It was influenced primarily by Perl, Smalltal...Perl, Lisp, Dylan, Pike, and CLU. The standard 1.8.7 implem...nspider.com/Languages/Ruby/QuickRef.html Ruby Annotationhttp...

  4180 days ago

• +35 more Pages

Top-level pages

• • Jitendra Narayan@admin

  

  Bioinformatics Definitions

  "Bioinformatics is a science of biological predictions and analysis" -...cular) Bio - informatics = is conceptualizing biology in term...part of bioinformatics, and techniques and algorithms were sp...lth of additional information can be obtained. The complete g...

  4180 days ago

• • Jitendra Narayan@admin

  

  BioProgramming

  The completion of the first human g...start of the modern DNA sequencing era which resulted in further inventio...of high-throughput DNA sequencing, so called the “high...mic level, speed up the genomic sequencing projects. In the f...sort of biological needs, which compel us to learn new biolo...

  4180 days ago

• +119 more Top-level pages

Wire posts

• • Neel@neelam

  

  For me as a newcomer bioinformatician this BOL website is my first love in Bioinformatics #BOLover

  4177 days ago

• • Jitendra Narayan@admin

  

  Video feature on BOL give an option to add bioinformatics video lectures/tutorials #BOLvideo #BOLover

  4150 days ago

• +1548 more Wire posts

News

• • Jitendra Narayan@admin

  

  Genomic Impact

  The ongoing genomic research in USA contributed $31 billion to the U.S. gross national product and helped support 152,000 jobs.  Reference: http://www.unitedformedicalresearch.com/wp-content/uploads/2013/06/The-Impact-of-Genomics-on-the-US-Economy.pdf

  4185 days ago

• • Jitendra Narayan@admin

  

  useR!

  The R project actively supports two conference series, organized regularly by members from the R community: useR! - providing a...rum to the R user community - and DSC - a platform for developers o...Albacete, Spain. http://www.edii.uclm.es/~useR-2013//  ...

  4184 days ago

• +215 more News

Opportunity posts

• • Jitendra Narayan@admin

  

  6 PhD Students @ TU Dresden

  At TU Dresden, Faculty of Computer Science, the DFG Research Training Group GRK 1907 “Role-based Software Infrastructures for continuous-context-s...approach are arranged with specialized courses that prepare t...documents summarizing their academic performance, and a stat...

  4180 days ago

• • Jit@jit.aber

  

  Research Associate(s)

  CSIR-INSTITUTE OF HIMALAYAN BIORESOURCE TECHNOLOGY (Council of Scientific and Industrial Research) PALAMPUR (H.P.)-176 061...gorithm development and sequence analysis on Next Generation...Age Relaxation: 5 years for SC/ST,3 years for OBC and widows...

  4177 days ago

• +616 more Opportunity posts

ResearchLabs posts

• • Jitendra Narayan@admin

  

  Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab

  ...anization and evolution of biological systems using computational biology and bioin...formatics techniques. We seek to accurately predict links, such a...systems using comprehensive genomics data like genome sequence an...tion and analysis software. Predicting biologically relevant pro...

  4180 days ago

• • Neel@neelam

  

  IBL laboratory

  The IBL laboratory focuses on the multi-disciplinary analyses of the global responses of model microorganisms, cyanobacteria (ma...PCC6803) and yeasts (mainly Saccharomyces cerevisae) to envir...e-saclay-ibitec-s/unites-de-recherche/service-de-biologie-int...

  4152 days ago

• +158 more ResearchLabs posts

Fun

• • Jitendra Narayan@admin

  

  Bioinformatician become producer/director !!!

  If a Bioinformatician starts producing Hindi Bollywood movies, na...Genefinder. Har Ligand jo dock karega. Alignment to hona h...re Paas Hai Aao Database Search Kare Bioinformatician No.1...quence Parayi *Warning: It contain hindi words.

  4151 days ago

• • Rahul Agarwal@raag

  

  Perl Poem: Parse it in both Perl and English!

  Larry's, er, corpus has fortunately been overshadow...resented at the Usenix Winter 1992 Technical Conference, entitled "Camels and Needle...ollowing poem published in both the Economist and the Guardian: #!/...close them, yet. accept (yourself, changes),bind (grief, despair);...

  4151 days ago

• +10 more Fun

Video

• • Manshi Raghubanshi@dreamgirl

  

  Personalised Medicine - Animation

  Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.

  4137 days ago

• • Shikha Logwani@shikha

  

  Influenza animation - flu virus mechanism

  Animation of the mechanism of an influenza virus and how Crucell's antibodies target the HA1 proteins o...s and prevent further spread of influenza. Client: Crucell Direction, Desi...rm Music & Sound Design: Javier Barrero, Logical Disorder Production Company...

  4085 days ago

• +112 more Video

Bio-Scripts

• • Poonam Mahapatra@poonam

  

  Install BLAST in Ubuntu/Linux and Window !

  #On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #Windows install...ad ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.7.1/ncbi-blas...ih.gov/blast/executables/blast+/2.7.1/ncbi-blast-2.7.1+-win64.exe #...

  1379 days ago

• • Nishi Singh@nishi

  

  Concatenate two given sequences, and find the length of the new sequence and also print out the second codon of the sequence

  #!/usr/bin/perl use strict; use warnings; #assign strings to variables my $DNA = "GATTACACAT"; my $polyA = "AAAA"; #concatenate two strings my $mo...ifiedDNA has length $DNAlength\n"; #extract the second codon in $modifie...

  3149 days ago

• +422 more Bio-Scripts

Polls

• • Manisha Mishra@manisha

  

  Which of the following programming language is best for a bioinformatics beginner?

  I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics tools or softw...ly, map reads, align reads, and expression analysis. Recommendations welcomed. Which l...

  3763 days ago

• • John Parker@parker

  

  Which math/statistics programming language/application do you most frequently use in bioinformatics?

  I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?

  3759 days ago

• +7 more Polls

Tryst

• • Jitendra Narayan@admin

  

  Interview with a bioinformatician series ...

  The aim of this series to interviews some notable bioinformaticians to get their views on various aspects of bioinformatics research. H...lly these answers will prove useful to others in the field, especially to those who are just st...

  3649 days ago

• • Jitendra Narayan@admin

  

  Tryst with a Bioinformatician # Dr Altan Kara

  ...r Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBITAK M...aims for the development of a computational method to design...lready a massive need for effective methods to eliminate the...

  2595 days ago

Groups

• 

  Bioinformatics Business

  Bioinformatics as a business, not to be confused with bioinformatics as a field of study, is at an interesting crossroads. As an academic branch of learning, bio...nary endeavor between computer science and molecular biology. B...business ideas. Your ideas and comments are welcome....

  4185 days ago

• 

  Genome Hackers

  INTIMATE secrets hidden in your DNA could be stolen without you even realising. By taking a glass from which you have drunk, a "genome hacker" could obtain a comprehensive scan of your geno...to Alzheimer's disease. However, as a computational biologist or bioi...

  4185 days ago

• +22 more Groups

Tags

• • Jitendra Narayan@admin

  

  Bio++ : C Language libraries for your biological need

  C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, it comes with a genuinely useful standard library that can itself be implemented in C, and it is both efficient and portable. C has always appealed to systems programmers who like the te...

  Tags: C, C++, Bio++, C libraries, Biological Libraries

  4180 days ago

• • Manshi Raghubanshi@dreamgirl

  

  Manshi Raghubanshi

  I recently join Bioinformatics as a post grad student. My interest is in genomics and next generation sequencing technologies. I love to explore the area and do my research in it.

  Skills: Biotechnology, Bioinformatics. Creative writting, Perl, C, C++

  3595 days ago

• +21 more Tags

Comments

• • BioStar@biostar

  

  Comment on "Keep Your Important SSH Session Running when You Disconnect from Server !!!"

  To block a node  srun --partition=compute --nodes=1 --ntasks-per-node=40 --pty bash.sh

  169 days ago

• • Abhi@abhinav

  

  Comment on "LoReTTA, a user-friendly tool for assembling viral genomes from PacBio sequence data"

  Detail paper here https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8111061/

  198 days ago

• +1006 more Comments