Results for "Chromosomal"
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About me: ...ine(BOL) founder. http://bioinformaticsonline.com/about Within the broad domain of bioinformatics and computational biology, I mainly focus on chromosomal breakpoint and amniotes evolu...Interests: Chromosomal Breakpoints17 days ago
Blogs
Dynamic chromosome breakpoints !!!
...nd sealing of the resulting recombined molecules happens. The “chromosomal breakpoints” refers to...965/). These breakage may lead to genetic diseases or participate to chromosomal rearranmgnets and contributed...3560 days ago
Structural variation: the hidden genomic treasure
...t on genome evolution and should not be neglected when studying the genetics of adaptation and speciation. SVs were classically defined as chromosomal rearrangements larger than 1k...2710 days ago
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Bookmarks
Software developed in pevsner lab
...a pediSNP: Analyze SNP Data From a Pedigree of Two Generations kcoeff: Calculate Cotterman Coefficients of SNP Genotype Data triPOD: Detects chromosomal abnormalities in parent-child...3506 days ago
RACA: Reference-Assisted Chromosome Assembly
...e-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequence scaffolds generated by NGS and assemblers into longer chromosomal fragments using comparative g...2958 days ago
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Pages
Genome Assembly Tools and Software - PART2 !!
...sisted Chromosome AssemblyRACA is an algorithm to reliably order and orient sequence scaffolds generated by NGS and assemblers into longer chromosomal fragments using comparative g...2693 days ago
Top-level pages
Apps for Busy Bioinformatics Researchers !!!
...ger/id637353801?mt=8 YeastGenome: iPhone/iPad Use YeastGenome to quickly find fundamental information about Saccharomyces cerevisae genes and chromosomal features. Search gene names,...3548 days ago
Tools for Searching Repeats And Palindromic Sequences
...striction endobucleases) designed to cut the DNA strands at specific locations (i.e., at palindromes). Palindromes may arise from brakeage and chromosomal inversions that form inverted...2218 days ago
Wire posts
News
Breaking chromosomes to study cancer !!!
...has a reciprocal translocation. Reciprocal chromosomal translocations occur followin...ns seen in leukemia and childhood sarcomas. Chromosomal translocations have been well...allow for the clarification of how and why chromosomal translocation occurs, which w...3586 days ago
- ...wn species of eukaryotes, a massive group that includes plants, animals, fungi and other organisms whose cells have a nucleus that houses their chromosomal DNA. To date, the genomes of...
2209 days ago
Opportunity posts
Post-doctoral Research Assistant in Genetics
...es and existing algorithms. The post holder will use cutting edge computational and laboratory approaches to generate chromosomal assemblies for sequenced genomes, study chromosomal structures and genome differe...3629 days ago
Postdoctoral Research Assistant at RVC
...ad Sci USA. 2013. 110 (5)). The post holder will use cutting edge computational and laboratory approaches to generate chromosomal assemblies for sequenced genomes, study chromosomal structures and differences be...2134 days ago
ResearchLabs posts
- ...ems. Research Interest Genomic Data Integration Microarray Analysis Gene and Protein Function Prediction Detection and Analysis of Chromosomal Abnormalities and Functional...
3859 days ago
Video
How DNA is Packaged (Advanced)
...omes known as chromatin. This structure, is then looped and further packaged using other proteins (which are not shown here) to give the final "chromosomal" shapes. It is this remarkabl...3884 days ago
Tags
CHSMiner: a GUI tool to identify chromosomal homologous segments
Background The identification of chromosomal homologous segments (CHS) within and between genomes is essential for comparative genomics. Various processes including insertion/deletion and inversion could cause the degeneration of CHSs. Results Here we present a Java software CHSMiner tha...Tags: CHSMiner, GUI, tool, identify, chromosomal, homologous, segments
2367 days ago
- Chromosomal rearrangement events are caused by abnormal breaking and rejoining of DNA molecules. They are responsible for many of the cancer related diseases. Detecting the DNA breaking and repairing mechanism, therefore, may offer vital clues about the pathologic causes and diagnostic/therapeuti...
Tags: Chromosomal, rearrangement, events, abnormal, breaking, DNA, SLIDESORT-BPR
2365 days ago
Comments
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Thanks for such an informative blog. I notice MCScan is missing. MCScan is an algorithm able to scan multiple genomes or subgenomes in order to identify putative homologous chromosomal regions, and align these regions using genes as anchors. More at http://www.ncbi.nlm.nih.gov/pubmed/222176003680 days ago
