Results for "Commands"
Bio-Scripts
Commands to install conda in Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads$ mkdir jittmp jit@jit-HP-Pro-3335-MT:~/Downloads$ cd jittmp/ jit@jit-HP-Pro-3335-MT:~/Downloads/jittmp$ curl -O https://repo.anaco...1512 days ago
Commands to install Statistics::R module in Ubuntu !
$ sudo apt-get install libstatistics-r-perl Reading package lists... Done Building dependency tree Reading state information... Done The following additional...1511 days ago
- jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ sudo docker system df TYPE TOTAL ACTIVE SIZE RECLAIMABLE Images...
1509 days ago
Set up WGD environment using conda !
...to write logs to (optional) --version Print version number -h, --help Show this message and exit. Commands: dmd All-vs.-all diamond...1204 days ago
Steps to install Conda on Linux !
...2020.11-Linux-x86_64.sh #Follow the yes/no flags and finish till the end #Check the installation $ conda -V A few other frequently used commands # list all the conda environ...1183 days ago
Commands to transfer files and folder in docker !
#To copy files between host machine and container (execute the commands on host, not inside container): $ docker cp FILE_OR_FOLDER_ON_HOST CONTAINER_ID:/CONTAINER_DIRECTORY #or $ docker cp CONTAINER_ID:FILE_OR_FOLDER_IN_CONTAINER HOST_DIRECTORY986 days ago
Commands to Remove White Space In Text Or String Using Awk And Sed In Linux
text=" ATGGTV AGTGACCTAGAGTGATGA G GGRTTT" echo "$text" | sed 's/ //g' OR echo "$text" | awk '{ gsub(/ /,""); print }' Return: ATGGTVAGTGACCTAGAGTGATGAGGGRTTT...956 days ago
- Built-In Variables In Awk Awk’s built-in variables include the field variables—$1, $2, $3, and so on ($0 is the entire line) — that break a line of text into individu...
895 days ago
Commands to get the detail of disk usage on Linux !
#A simplistic approach would be du -shc /home/* du -shc /home/jnarayan #To sort it: du -smc /home/* | sort -n #There is also a wellknown Perl script that has the option of mailing disk usage reports per user: durep http://www.ubuntugeek.com/create-disk-usage-reports-with-durep.html816 days ago
- #Commands to run PERF PERF --format fasta -t 30 -i reference.fasta -o PERF_output.tsv --include-atomic -m 2 -M 7 -l 12
792 days ago
