Results for "Comparison Tool"
Bio-Scripts
R script to visualize fastANI core-genome comparison
####### # Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://..._file=commandArgs(TRUE)[3] library(genoPlotR) #Read fastANI output comp...1101 days ago
- ➜ bin git:(master) ✗ ./fastq-dump --help Usage: ./fastq-dump [options] [...] ....rror --legacy-report use legacy style 'Written spots' for tool ./fastq-dump : 2.9.1 ( 2....
2125 days ago
Installing Porechop on Ubuntu !
➜ Tools git:(master) ✗ git clone https://github.com/rrwick...869/869), done. Checking connectivity... done. ➜ Tools git:(master) ✗ cd Porechop...IN_SPLIT_READ_SIZE] [-h] [--version] Porechop: a tool for finding adapters in Oxfor...2105 days ago
- ➜ Tools git:(master) ✗ git clone https://github.com/Nextomics/nextsv....ing connectivity... done. ➜ Tools git:(master) ✗ cd nextsv ➜ next...amHttp_p.cpp:409:59: warning: comparison between signed and unsi.../VCFPrinter.cpp.o /home/urbe/Tools/nextsv/aligners_and_callers/...
2098 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wg...[] Usage template for all tools (uses --spark-runner LOCAL when used with a Spark tool) gatk AnyTool toolArgs...(BETA Tool) (Internal) Collects read met...(BETA Tool) Generate recalibration table...
2074 days ago
- #!/bin/bash Plot the coverage script chr=$1 start=$2 end=$3 samtools depth deduped_MA605.bam > deduped_M...
2003 days ago
Installing ggplot2 and its dependencies on Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads/MitoHunter/minidot/bin$ sudo R [sudo] password for jit: R version 3.4.4 (2...ng -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Comparison.cpp -o Comp...1549 days ago
Pack a perl program with their dependencies on Ubuntu !
...idly developing field of comparative genomics. Comparison of the fruit fly genome with...arks Neelam Jha@neelam GSP4PDB: a web tool to visualize, search and expl...y Neelam Jha yesterday GSP4PDBwebtoolvisualizesearchexploreprotein-...1510 days ago
- #This method can be applied directly to FASTA or a FASTQ file, compressed or uncompressed files. Seqtk is a fast and lightweight tool for processing biological dat...
1401 days ago
List of string comparison algorithms !
String comparison: Levenshtein Distance Damerau-Levenshtein Distance Jaro Distance Jaro-Winkler Distance Match Rating Approach Comparison Hamming Distance More at https://jellyfish.readthedocs.io/en/latest/comparison.html981 days ago
