Results for "Comparison Tool"

Blogs

  • Ancestral sequence reconstruction (ASR) or ancestral gene/sequence reconstruction/resurrection tools to study molecular evolution

    ...quence/ reconstruction (ASR) tools:  inferCars Reconstructs co...ng ancestral genome maps from the comparison of the organization of...genomes. FastML A user-friendly tool for the reconstruction of anc...od for Gene Order Analysis A web tool for the reconstruction of phy...

    2543 days ago

  • String graph based genome assembly software and tools !

    In graph theory, a string graph is an inte...ng graph’. Following are the genome assembly tools based on string graph: 1.SG...ed to contigs. BASE is a practically efficient tool for constructing contig, with...

    2341 days ago

  • Bioinformatics tools developed for Oxford Nanopore data analysis !

    MinION is the only portable real-time device for..., and string graph. List of analysis tools developed for Oxford Nanopor...WA Fast nanopore data tuned alignment tool https://github.com/lh3/bwa G...nanopolish nanoporeVariant-detection tool for nanopore sequence datahtt...

    2333 days ago

  • Install ImageMagick from Unix Source

    ImageMagick builds on a variety of Unix and Unix...ert x86_64-pc-linux-gnu file names to toolchain format... func_convert_f...libraries... pass_allchecking for dlltool... nochecking how to associat...s commandsconfig.status: executing libtool commandsconfig.status: execut...

    2159 days ago

  • Installing Trinity !

    ...ntering directory '/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/Inchw...ntering directory '/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/Inchw...DeBruijn.cpp:199:39: warning: comparison between signed and unsigned i...orking directory: "/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6...

    2146 days ago

  • List of motif discovery tools !

    ...p; Following are the list of tools for motif discovery:   2Dsw...roteins. EXPASY Proteome Tools Collection Use a collection...d kinases. MeMo -- a web tool for prediction of protein met...ple motifs. SDPpred -- A Tool for Prediction of Amino Acid...

    2006 days ago

  • AWK for beginners !

    AWK is a standard tool on every POSIX-compliant UNIX system. It’s like flex/lex, fr...d split on delimiters, AWK is probably the right tool for the job. #...print "Good ol' for loop"; # As for comparisons, they're the standards...

    1849 days ago

  • Software for genome assembly !

    List of bioinformatics tools/Software Website References for genome assembly...://github.com/lh3/miniasm 4 PBJelly scaffolding tool https://sourceforge.net/projects/pb-jelly/ 5 ARCS scaffolding tool https://github.com/bcgsc/arcs...

    1357 days ago

  • Bioinformatics tools for telomere to telomere assembly !

    ● Merfin – k-mer-based assembly and variant ca...Cheng @Yuanyuan929)● svpack – tools for filtering, comparing, an...CF format (Aaron Wenger)● JumboDB – tool for de Bruijn graph construct...

    1005 days ago

  • Protocol for De novo Genome Assembly using Illumina Reads

    In this protocol, we address and describe the de novo assembly method for small...mis-assemblies can occur. Mis-assembly checking and assembly metric tools:QUAST - Quality assessment tool for genome assembly http://bi...

    1217 days ago