Results for "Comparison Tool"
Top-level pages
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be executed...s develop algorithms. Pseudocode is a "text-based" detail (algorithmic) design tool. The rules of Pseudocode are...2672 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b sort comparison routine variables. @ARGV The command-line args. Regular Expressions $<dig...2657 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl framework...lightweight system monitoring tool. vsespb/mt-aws-glacier ...ns, macros, ... noxxi/p5-ssl-tools - various standalone pe...n Simplenote tobert/perl-ssh-tools - A more capable DSH /...rt-parser - A Perl based tool to parse DMARC reports from a...2502 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...ge.net/projects/lmat/ stringMLST k-mer-based tool for MLST directly from the genome s...Taxonomer k-mer-based ultrafast metagenomics tool for assigning taxonomy to seq...bio.io/ Other d2-tools Word-based (k-tuple) comparison (pairwise dissimilarity...2384 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00&r...rxiv.org/content/early/2016/09/02/036558 Citrus: A toolkit for single cell sequencing...s://github.com/jw156605/SLICER SinQC: A Method and Tool to Control Single-cell RNA-se...2363 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems... Standalone command line tool, takes just a few minutes per genom...vironment. BEACON (automated tool for Bacterial GEnome Annotation ComparisON), a fast tool for an automated and a systematic comparison of different annotation...2344 days ago
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
BBSplit internally uses BBMap to map reads to multiple genomes at once, and determine whi...mation regarding which sequences came from which reference file. BBSplit is a tool that bins reads by mapping to...2327 days ago
- There are several ways you can convert...f(NR%4==2) print;}' > file.fa FASTX-toolkit fastq_to_fasta is available in the FASTX-toolkit that scales really well wi...eveloper, there is another option using a tool called seqtk seqtk seq...
2318 days ago
List of visualization tools for network biology
Network analysis is any structured techniqu...ies and/or population level. Few tools published in BMC are listed...graph Collection of network analysis tools with the emphasis on efficie...ta http://tinyurl.com/yEdGraph/ Web tools for network analysis APID&n...2301 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for sho...ist of genome alignment visualization tools, which could be useful for a...amView Genome browser and annotation tool that allows visualization of...r.htm JVM Java Visual Mapping tool for NGS reads http://www.spr...2296 days ago
